RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 CYP51A1Q16850 503 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 TBRG1Q3YBR2 411 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SLC9B1Q4ZJI4 515 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 CYB5R2Q6BCY4 276 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 MSANTD1Q6ZTZ1 278 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 IL17RELQ6ZVW7 336 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 HIST3H2AQ7L7L0 130 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SERPINA11Q86U17 422 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 RANBP3LQ86VV4 465 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-205ENST00000480127 UEVLDQ8IX04 471 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 OR6N1Q8NGY5 312 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 NFKBIDQ8NI38 313 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 HIST1H2ACQ93077 130 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SLC38A4Q969I6 547 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 MAL2Q969L2 176 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF524Q96C55 264 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SLC38A2Q96QD8 506 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 SPATA9Q9BWV2 254 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 OBP2BQ9NPH6 170 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 TCF7L2Q9NQB0 619 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 CCDC167Q9P0B6 97 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 ING1Q9UK53 422 aaPredicted RBP6.2□□□□□ -1.42
COL17A1-205ENST00000480127 KCNS2Q9ULS6 477 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 ANGPT4Q9Y264 503 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 GPR45Q9Y5Y3 372 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 USH1CQ9Y6N9 552 aa6.2□□□□□ -1.42
COL17A1-205ENST00000480127 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.2□□□□□ -1.42
COL17A1-205ENST00000480127 M0R3G1 203 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 FAAHO00519 579 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 ANGPT2O15123 496 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 DNAJA2O60884 412 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 RAB36O95755 333 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 TFPTP0C1Z6 253 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 UMPSP11172 480 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 APEHP13798 732 aaKnown RBP6.19□□□□□ -1.42
COL17A1-205ENST00000480127 USF1P22415 310 aaPredicted RBP6.19□□□□□ -1.42
COL17A1-205ENST00000480127 PAX7P23759 505 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 IL12AP29459 219 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 AQP1P29972 269 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 SELENOPP49908 381 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 IDH3GP51553 393 aaPredicted RBP6.19□□□□□ -1.42
COL17A1-205ENST00000480127 AQP5P55064 265 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 SELENOVP59797 346 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 TUBA1BP68363 451 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 TUBA4AP68366 448 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 PMS2P3Q13401 168 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 MPP2Q14168 576 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 MFSD13AQ14CX5 517 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 RGNQ15493 299 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 GTDC1Q4AE62 458 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 AGKQ53H12 422 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 ALG10BQ5I7T1 473 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 FAM120AOSQ5T036 256 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 RNF220Q5VTB9 566 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 REEP3Q6NUK4 255 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 ANKRD16Q6P6B7 361 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 SLC2A7Q6PXP3 512 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 C5orf46Q6UWT4 87 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 TUBA1AQ71U36 451 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 SPATA21Q7Z572 469 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 ARMC8Q8IUR7 673 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 KDM8Q8N371 416 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 CLIP4Q8N3C7 705 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 SCAIQ8N9R8 606 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF540Q8NDQ6 660 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 PIK3C3Q8NEB9 887 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 OR9I1Q8NGQ6 314 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 STK35Q8TDR2 534 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 C10orf105Q8TEF2 133 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 DNAJA4Q8WW22 397 aaPredicted RBP6.19□□□□□ -1.42
COL17A1-205ENST00000480127 PROX1Q92786 737 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 TMEM45BQ96B21 275 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 ANKRD27Q96NW4 1050 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 MUS81Q96NY9 551 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF385AQ96PM9 386 aaKnown RBP6.19□□□□□ -1.42
COL17A1-205ENST00000480127 OR52B2Q96RD2 323 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 RAB1BQ9H0U4 201 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 RABEP2Q9H5N1 569 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 CRLF2Q9HC73 371 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 A4GALTQ9NPC4 353 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 HAO1Q9UJM8 370 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 FBXO9Q9UK97 447 aaPredicted RBP6.19□□□□□ -1.42
COL17A1-205ENST00000480127 RAB21Q9UL25 225 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 POFUT2Q9Y2G5 429 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 PCDHB14Q9Y5E9 798 aa6.19□□□□□ -1.42
COL17A1-205ENST00000480127 YLPM1P49750 1951 aaKnown RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 TRAV36DV7A0A075B6V5 113 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 LOC100289279A0A1B0GTE1 492 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 PRAMEF27A3QJZ7 478 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 MCIDASD6RGH6 385 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 C11orf98E9PRG8 122 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 H7C417 338 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 M0R082 166 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 TPD52L2O43399 206 aaKnown RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 SNNO75324 88 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 ENTPD5O75356 428 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 SEC14L2O76054 403 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 OR4A8P0C604 315 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 ZCCHC18P0CG32 403 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 PRG2P13727 222 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms