RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 C2orf72A6NCS6 295 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 CDRT15L2A8MXV6 281 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 PLPP3O14495 311 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 AKAP8O43823 692 aaKnown RBP9.95□□□□□ -0.82
VTI1A-204ENST00000480057 GLCEO94923 617 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 OR6A2O95222 327 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 RENP00797 406 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 HSMCR30P0CW71 290 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF17P17021 662 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 CD53P19397 219 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 F8A1P23610 371 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 RBMS1P29558 406 aaKnown RBP9.95□□□□□ -0.82
VTI1A-204ENST00000480057 GRPRP30550 384 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 IDUAP35475 653 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 SERPINB10P48595 397 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 DSCR4P56555 118 aaPredicted RBP9.95□□□□□ -0.82
VTI1A-204ENST00000480057 RPS7P62081 194 aaKnown RBP9.95□□□□□ -0.82
VTI1A-204ENST00000480057 HSF2Q03933 536 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 GPR50Q13585 617 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 KRR1Q13601 381 aaKnown RBP9.95□□□□□ -0.82
VTI1A-204ENST00000480057 GALEQ14376 348 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 SPCS2Q15005 226 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 SSX1Q16384 188 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF239Q16600 458 aaKnown RBP9.95□□□□□ -0.82
VTI1A-204ENST00000480057 KLHL12Q53G59 568 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 ACER2Q5QJU3 275 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 LCE2DQ5TA82 110 aaPredicted RBP9.95□□□□□ -0.82
VTI1A-204ENST00000480057 FAM205BPQ63HN1 556 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 OR5M10Q6IEU7 315 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 ARSKQ6UWY0 536 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 USP43Q70EL4 1123 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 IGFN1Q86VF2 1251 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 DTX1Q86Y01 620 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 GTPBP8Q8N3Z3 284 aaPredicted RBP9.95□□□□□ -0.82
VTI1A-204ENST00000480057 SIRT6Q8N6T7 355 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 ARIH2OSQ8N7S6 290 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 EXD3Q8N9H8 876 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 LSM14AQ8ND56 463 aaKnown RBP9.95□□□□□ -0.82
VTI1A-204ENST00000480057 SDR9C7Q8NEX9 313 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 OR4F15Q8NGB8 312 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 OR51G2Q8NGK0 314 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 POC1BQ8TC44 478 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 NKD1Q969G9 470 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 MRPL48Q96GC5 212 aaKnown RBP9.95□□□□□ -0.82
VTI1A-204ENST00000480057 FER1L6-AS2Q96M78 137 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 Q96M85 177 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 MNTQ99583 582 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 COQ7Q99807 217 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 OR51V1Q9H2C8 321 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 MED20Q9H944 212 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 ADGRL4Q9HBW9 690 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 ALKBH4Q9NXW9 302 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 ABI3Q9P2A4 366 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 TEKT2Q9UIF3 430 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 ADAM18Q9Y3Q7 739 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 PCNX2A6NKB5 2137 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 SPAARA0A1B0GVQ0 90 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 A6NIZ1 184 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 LIPT2A6NK58 231 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 C12orf71A8MTZ7 269 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 SEC14L5O43304 696 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 CBR3O75828 277 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 OR2T7P0C7T2 308 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 CCL3P10147 92 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 GAAP10253 952 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 CEACAM1P13688 526 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 LIFP15018 202 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 SPI1P17947 270 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 GALP22466 123 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 GADD45AP24522 165 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 PSMA1P25786 263 aaKnown RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 GTF2E2P29084 291 aaKnown RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 BLVRAP53004 296 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 TAS2R43P59537 309 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 RAP1BP61224 184 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 RPL27P61353 136 aaKnown RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 RAP1AP62834 184 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 GABREP78334 506 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 ROR2Q01974 943 aaKnown RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 AIMP2Q13155 320 aaKnown RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 DYNC1I2Q13409 638 aaKnown RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 DGUOKQ16854 277 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 C1QL3Q5VWW1 255 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 TIGD3Q6B0B8 471 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 FCRLBQ6BAA4 426 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 POMZP3Q6PJE2 187 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 PAQR6Q6TCH4 344 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF322Q6U7Q0 402 aaPredicted RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 H1FNTQ75WM6 255 aaPredicted RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 PHC2Q8IXK0 858 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 CYB561A3Q8NBI2 242 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF248Q8NDW4 579 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 OR2T4Q8NH00 348 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 OR2T27Q8NH04 317 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 HAVCR2Q8TDQ0 301 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 PSMF1Q92530 271 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 UFD1Q92890 307 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 KIAA1143Q96AT1 154 aaPredicted RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 SLC25A36Q96CQ1 311 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms