RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 RASSF5Q8WWW0 418 aa13.2□□□□□ -0.3
PRKN-207ENST00000479615 NEUROG1Q92886 237 aa13.2□□□□□ -0.3
PRKN-207ENST00000479615 KTI12Q96EK9 354 aaPredicted RBP13.2□□□□□ -0.3
PRKN-207ENST00000479615 CGREF1Q99674 301 aa13.2□□□□□ -0.3
PRKN-207ENST00000479615 SMR3AQ99954 134 aa13.2□□□□□ -0.3
PRKN-207ENST00000479615 CPPED1Q9BRF8 314 aaPredicted RBP13.2□□□□□ -0.3
PRKN-207ENST00000479615 PTDSS2Q9BVG9 487 aa13.2□□□□□ -0.3
PRKN-207ENST00000479615 VPS13CQ709C8 3753 aa13.2□□□□□ -0.3
PRKN-207ENST00000479615 NIPBLQ6KC79 2804 aaeCLIP13.19□□□□□ -0.3
PRKN-207ENST00000479615 SLC43A1O75387 559 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 MFN2O95140 757 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 NPPAP01160 153 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 CD8AP01732 235 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 DSCR9P59020 149 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 HOXC5Q00444 222 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 CHRNB3Q05901 458 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 VEZF1Q14119 521 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 CYP51A1Q16850 503 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 NIPAL3Q6P499 406 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 ANKRD16Q6P6B7 361 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 PATL1Q86TB9 770 aaKnown RBP13.19□□□□□ -0.3
PRKN-207ENST00000479615 MUC15Q8N387 334 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 SCAIQ8N9R8 606 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 PIK3C3Q8NEB9 887 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 TMEM43Q9BTV4 400 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 ZNF385DQ9H6B1 395 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 NPHS2Q9NP85 383 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 FBXO9Q9UK97 447 aaPredicted RBP13.19□□□□□ -0.3
PRKN-207ENST00000479615 USF3Q68DE3 2245 aa13.19□□□□□ -0.3
PRKN-207ENST00000479615 PRR14LQ5THK1 2151 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 ARPC4-TTLL3A0A0A6YYG9 625 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 A0A0B4J2E0 115 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 A0A0G2JND7 137 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 A0A1B0GX12 115 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 E7EQL1 145 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 SMAD7O15105 426 aaKnown RBP13.18□□□□□ -0.3
PRKN-207ENST00000479615 TPST1O60507 370 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 TROVE2P10155 538 aaKnown RBP eCLIP13.18□□□□□ -0.32e-6■■■■■ 29.4
PRKN-207ENST00000479615 HTR2AP28223 471 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 APOBEC3AP31941 199 aaPredicted RBP13.18□□□□□ -0.3
PRKN-207ENST00000479615 CDKN1AP38936 164 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 SELENOPP49908 381 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 FABP6P51161 128 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 FOXG1P55316 489 aaPredicted RBP13.18□□□□□ -0.3
PRKN-207ENST00000479615 PCBP3P57721 371 aaKnown RBP13.18□□□□□ -0.3
PRKN-207ENST00000479615 PPP2R2BQ00005 443 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 TNK1Q13470 666 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 CYLC2Q14093 348 aaPredicted RBP13.18□□□□□ -0.3
PRKN-207ENST00000479615 RAB35Q15286 201 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 OR1Q1Q15612 314 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 COQ5Q5HYK3 327 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 C9orf135Q5VTT2 229 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 ZNF613Q6PF04 617 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 SNX32Q86XE0 403 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 C10orf111Q8N326 155 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 OR1K1Q8NGR3 316 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 TAAR8Q969N4 342 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 KCNS3Q9BQ31 491 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 KATNB1Q9BVA0 655 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 ASPNQ9BXN1 380 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 IKZF5Q9H5V7 419 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 PMF1-BGLAPU3KQ54 211 aa13.18□□□□□ -0.3
PRKN-207ENST00000479615 A0A1W2PR80 420 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 H7C417 338 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 M0QX08 132 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 M0R082 166 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 ZNF432O94892 652 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 LGI1O95970 557 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 MT-ATP6P00846 226 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 CDH2P19022 906 aaPredicted RBP13.17□□□□□ -0.3
PRKN-207ENST00000479615 AQP1P29972 269 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 CLDN17P56750 224 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 NFYCQ13952 458 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 TBRG1Q3YBR2 411 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 GPR137CQ8N3F9 429 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 ZNF417Q8TAU3 575 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 RNF217Q8TC41 542 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 SLC41A3Q96GZ6 507 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 LRR1Q96L50 414 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 ZNF587Q96SQ5 575 aaPredicted RBP13.17□□□□□ -0.3
PRKN-207ENST00000479615 RHNO1Q9BSD3 238 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 KAT8Q9H7Z6 458 aaKnown RBP13.17□□□□□ -0.3
PRKN-207ENST00000479615 KLHL14Q9P2G3 628 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 NOX1Q9Y5S8 564 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 ATP23Q9Y6H3 246 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 CADP27708 2225 aa13.17□□□□□ -0.3
PRKN-207ENST00000479615 IGKV1D-42A0A075B6H8 117 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 VSTM5A8MXK1 200 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 IGHV4-39P01824 125 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 CRYAAP02489 173 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 NQO1P15559 274 aaKnown RBP13.16□□□□□ -0.3
PRKN-207ENST00000479615 GRPRP30550 384 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 ROR2Q01974 943 aaKnown RBP13.16□□□□□ -0.3
PRKN-207ENST00000479615 DMTNQ08495 405 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 MAPRE2Q15555 327 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 GLIPR1L2Q4G1C9 344 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 C11orf71Q6IPW1 123 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 DNM1P46Q6ZS02 220 aa13.16□□□□□ -0.3
PRKN-207ENST00000479615 Q71RC1 249 aaPredicted RBP13.16□□□□□ -0.3
PRKN-207ENST00000479615 PTOV1Q86YD1 416 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms