RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 CDK5Q00535 292 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 DBPQ10586 325 aaPredicted RBP11.7□□□□□ -0.54
CHD3-210ENST00000479080 NFATC3Q12968 1075 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 PTGES3Q15185 160 aaKnown RBP11.7□□□□□ -0.54
CHD3-210ENST00000479080 CLEC12AQ5QGZ9 265 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 C6orf52Q5T4I8 152 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 SLX4IPQ5VYV7 408 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 C12orf73Q69YU5 71 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 ARHGAP11AQ6P4F7 1023 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 PAQR6Q6TCH4 344 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 USP51Q70EK9 711 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 H1FNTQ75WM6 255 aaPredicted RBP11.7□□□□□ -0.54
CHD3-210ENST00000479080 FAM122BQ7Z309 247 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 CDK20Q8IZL9 346 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 GHDCQ8N2G8 530 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 OR5M9Q8NGP3 310 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 ROBO4Q8WZ75 1007 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 RDH12Q96NR8 316 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 ADI1Q9BV57 179 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 TAPBPLQ9BX59 468 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 TSSK6Q9BXA6 273 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 ASPNQ9BXN1 380 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 ZNF556Q9HAH1 456 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 SLC25A19Q9HC21 320 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 FAM118AQ9NWS6 357 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 KLHL13Q9P2N7 655 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 CLCF1Q9UBD9 225 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 NDRG4Q9ULP0 352 aaKnown RBP11.7□□□□□ -0.54
CHD3-210ENST00000479080 CAMK2AQ9UQM7 478 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 ADAM18Q9Y3Q7 739 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 CORINQ9Y5Q5 1042 aa11.7□□□□□ -0.54
CHD3-210ENST00000479080 CLCA1A8K7I4 914 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 C11orf98E9PRG8 122 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 BLOC1S5-TXNDC5H3BN57 136 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 IMPA2O14732 288 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 SLC16A6O15403 523 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 DNPH1O43598 174 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 NDUFB2O95178 105 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 SLC2A10O95528 541 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 PPP1R3DO95685 299 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 TGM6O95932 706 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 F13BP05160 661 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 GNAO1P09471 354 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 POU1F1P28069 291 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 NTF4P34130 210 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 CARD18P57730 90 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 NUP107P57740 925 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 PMS2P3Q13401 168 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 GINS1Q14691 196 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 MFSD13AQ14CX5 517 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 PGGHGQ32M88 737 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 ZNF362Q5T0B9 420 aaPredicted RBP11.69□□□□□ -0.54
CHD3-210ENST00000479080 RTL6Q6ICC9 239 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 SEM1Q6ZVN7 128 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 RPRMLQ8N4K4 120 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 MEIOBQ8N635 442 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 ZIC4Q8N9L1 334 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 FNDC9Q8TBE3 224 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 RNF128Q8TEB7 428 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 TFAP2CQ92754 450 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 TSPAN32Q96QS1 320 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 NRIP3Q9NQ35 241 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 TBC1D23Q9NUY8 699 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 B3GALT5Q9Y2C3 310 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 ZNF835Q9Y2P0 537 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 FAM215AQ9Y5M1 114 aa11.69□□□□□ -0.54
CHD3-210ENST00000479080 SMG1Q96Q15 3661 aaKnown RBP11.68□□□□□ -0.54
CHD3-210ENST00000479080 OR14I1A6ND48 311 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 CYTIPO60759 359 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 PLGP00747 810 aaPredicted RBP11.68□□□□□ -0.54
CHD3-210ENST00000479080 IGHMP01871 453 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 ADORA3P0DMS8 318 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 EDNRAP25101 427 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 CAPGP40121 348 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 GIPRP48546 466 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 RAD23AP54725 363 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 ERVK-25P63136 954 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 CSNK2A1P68400 391 aaPredicted RBP11.68□□□□□ -0.54
CHD3-210ENST00000479080 PUDPQ08623 228 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 MELKQ14680 651 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 SLC17A1Q14916 467 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 PON3Q15166 354 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 ACSF3Q4G176 576 aaPredicted RBP11.68□□□□□ -0.54
CHD3-210ENST00000479080 KRTCAP3Q53RY4 240 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 ALG10Q5BKT4 473 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 ZNF519Q8TB69 540 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 ZPLD1Q8TCW7 415 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 ABHD3Q8WU67 409 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 UBE2FQ969M7 185 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 CPNE4Q96A23 557 aaPredicted RBP11.68□□□□□ -0.54
CHD3-210ENST00000479080 SARAFQ96BY9 339 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 TXNDC15Q96J42 360 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 ZNF570Q96NI8 536 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 ZNF184Q99676 751 aaPredicted RBP11.68□□□□□ -0.54
CHD3-210ENST00000479080 KATNB1Q9BVA0 655 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 VCX3BQ9H321 246 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 ZNF226Q9NYT6 803 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 AASSQ9UDR5 926 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 RALYQ9UKM9 306 aaKnown RBP11.68□□□□□ -0.54
CHD3-210ENST00000479080 PCDHGB5Q9Y5G0 923 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms