RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ABHD13Q7L211 337 aa19.51■□□□□ 0.71
SDF4-206ENST00000478938 NDUFAF7Q7L592 441 aa19.51■□□□□ 0.71
SDF4-206ENST00000478938 ETFBKMTQ8IXQ9 262 aa19.51■□□□□ 0.71
SDF4-206ENST00000478938 RASGEF1AQ8N9B8 481 aa19.51■□□□□ 0.71
SDF4-206ENST00000478938 MESP1Q9BRJ9 268 aa19.51■□□□□ 0.71
SDF4-206ENST00000478938 SUCNR1Q9BXA5 334 aa19.51■□□□□ 0.71
SDF4-206ENST00000478938 ZCCHC2Q9C0B9 1178 aaKnown RBP19.51■□□□□ 0.71
SDF4-206ENST00000478938 SELENOIQ9C0D9 397 aa19.51■□□□□ 0.71
SDF4-206ENST00000478938 SFXN1Q9H9B4 322 aa19.51■□□□□ 0.71
SDF4-206ENST00000478938 SIRT3Q9NTG7 399 aaPredicted RBP19.51■□□□□ 0.71
SDF4-206ENST00000478938 SLC27A6Q9Y2P4 619 aa19.51■□□□□ 0.71
SDF4-206ENST00000478938 RNASEK-C17orf49H0YIS7 233 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 AGPAT2O15120 278 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 PIN1P1O15428 100 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 SNRNP70P08621 437 aaKnown RBP19.5■□□□□ 0.71
SDF4-206ENST00000478938 SRMP19623 302 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 ITPKBP27987 946 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 LIPNQ5VXI9 398 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 HAVCR1Q96D42 359 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 PIK3IP1Q96FE7 263 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 FBXO44Q9H4M3 255 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 PIAS3Q9Y6X2 628 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 NUDT19A8MXV4 375 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 SLC16A8O95907 504 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 GNRH1P01148 92 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 CHRM4P08173 479 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 CLTBP09497 229 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 GTF2F2P13984 249 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 SLBPQ14493 270 aaKnown RBP eCLIP19.5■□□□□ 0.71
SDF4-206ENST00000478938 SLCO4C1Q6ZQN7 724 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 SMPDL3AQ92484 453 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 RGP1Q92546 391 aaPredicted RBP19.5■□□□□ 0.71
SDF4-206ENST00000478938 FBXL4Q9UKA2 621 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 ICKQ9UPZ9 632 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 LTBP3Q9NS15 1303 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 WDR90Q96KV7 1748 aa19.5■□□□□ 0.71
SDF4-206ENST00000478938 A0A1B0GTI1 187 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 MBTPS2O43462 519 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 ADH1AP07327 375 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 IL9P15248 144 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 NME2P22392 152 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 PTGER1P34995 402 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 AP1S1P61966 158 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 GAMTQ14353 236 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 SURF2Q15527 256 aaPredicted RBP19.49■□□□□ 0.71
SDF4-206ENST00000478938 ENPP7Q6UWV6 458 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 CLEC9AQ6UXN8 241 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 TPGS1Q6ZTW0 290 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 PPP1R3BQ86XI6 285 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 FAM24BQ8N5W8 94 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 OR1J2Q8NGS2 313 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 TMEM255BQ8WV15 326 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 NRSN2Q9GZP1 204 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 ADGRL4Q9HBW9 690 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 TRIP12Q14669 1992 aaPredicted RBP19.49■□□□□ 0.71
SDF4-206ENST00000478938 K7ERQ8 282 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 SLC16A5O15375 505 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 GYPBP06028 91 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 SBK2P0C263 348 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 NR2C1P13056 603 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 GLP1RP43220 463 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 CDKN3Q16667 212 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 ALKBH2Q6NS38 261 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 INO80EQ8NBZ0 244 aaPredicted RBP19.49■□□□□ 0.71
SDF4-206ENST00000478938 OR4E2Q8NGC2 313 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 DIO2Q92813 273 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 SMIM19Q96E16 107 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 AKR1E2Q96JD6 320 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 IP6K3Q96PC2 410 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 C2orf88Q9BSF0 95 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 CHST5Q9GZS9 411 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 CACFD1Q9UGQ2 172 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 WASF3Q9UPY6 502 aa19.49■□□□□ 0.71
SDF4-206ENST00000478938 A0A0B4J2A0 478 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 H7C417 338 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 IFNA2P01563 188 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 PMP2P02689 132 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 FAM157CP0CG43 387 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 HIST1H1BP16401 226 aaKnown RBP19.48■□□□□ 0.71
SDF4-206ENST00000478938 S100A2P29034 98 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 TAF10Q12962 218 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 AIMP2Q13155 320 aaKnown RBP19.48■□□□□ 0.71
SDF4-206ENST00000478938 FNDC3BQ53EP0 1204 aaKnown RBP19.48■□□□□ 0.71
SDF4-206ENST00000478938 VWA2Q5GFL6 755 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 DHRS11Q6UWP2 260 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 OR2G2Q8NGZ5 317 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 OR5P2Q8WZ92 322 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 INPP5EQ9NRR6 644 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 WSB2Q9NYS7 404 aaPredicted RBP19.48■□□□□ 0.71
SDF4-206ENST00000478938 KLHL42Q9P2K6 505 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 MTFP1Q9UDX5 166 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 SHPKQ9UHJ6 478 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 TMEM189-UBE2V1I3L0A0 370 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 IFNGP01579 166 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 CD80P33681 288 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 CAV2P51636 162 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 CDK5R1Q15078 307 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 ZNF239Q16600 458 aaKnown RBP19.48■□□□□ 0.71
SDF4-206ENST00000478938 MRM1Q6IN84 353 aaKnown RBP19.48■□□□□ 0.71
SDF4-206ENST00000478938 FAM111BQ6SJ93 734 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms