RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 PLEKHG2Q9H7P9 1386 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 IGHV3OR16-13A0A075B7E8 117 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 DLGAP1O14490 977 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 MBTPS2O43462 519 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 H6PDO95479 791 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 IGHV2-5P01817 119 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 THY1P04216 161 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 C2P06681 752 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 OR8G3PP0DMU2 310 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 TFPI2P48307 235 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 ZNF763Q0D2J5 394 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 TGFBIQ15582 683 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 CHRNA6Q15825 494 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 NIPA1Q7RTP0 329 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 ZNF677Q86XU0 584 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 OFCC1Q8IZS5 231 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 C6orf223Q8N319 242 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 COMMD1Q8N668 190 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 OR10G3Q8NGC4 313 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 TYMSOSQ8TAI1 123 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 FGF11Q92914 225 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 NEIL2Q969S2 332 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 ITCHQ96J02 903 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 SMIM14Q96QK8 99 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 SH3GL1Q99961 368 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 C20orf24Q9BUV8 137 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 DEFB126Q9BYW3 111 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 PITPNC1Q9UKF7 332 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 UGT2A1Q9Y4X1 527 aa3.81□□□□□ -1.8
UPF3B-203ENST00000478840 INSRP06213 1382 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 USP47Q96K76 1375 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 CLOCKO15516 846 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 DNAJB6O75190 326 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 KLK3P07288 261 aaPredicted RBP3.8□□□□□ -1.8
UPF3B-203ENST00000478840 P0C879 139 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 STAG3L3P0CL85 134 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 ABOP16442 354 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 PRKAR2BP31323 418 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 KLK7P49862 253 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 GPM6AP51674 278 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 MRPS22P82650 360 aaKnown RBP3.8□□□□□ -1.8
UPF3B-203ENST00000478840 KIAA0040Q15053 153 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 MARC1Q5VT66 337 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 CERS6Q6ZMG9 384 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 OTUD6AQ7L8S5 288 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 TMCO2Q7Z6W1 182 aaPredicted RBP3.8□□□□□ -1.8
UPF3B-203ENST00000478840 PLA2G4DQ86XP0 818 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 SLC39A11Q8N1S5 342 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 NKAPP1Q8N9T2 125 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 FNDC5Q8NAU1 212 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 OR51S1Q8NGJ8 323 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 RHOXF1Q8NHV9 184 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 MRAPQ8TCY5 172 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 PIBF1Q8WXW3 757 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 FGF14Q92915 247 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 FAM122AQ96E09 287 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 MS4A4EQ96PG1 132 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 EHD1Q9H4M9 534 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 ZDHHC11Q9H8X9 412 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 VNN3Q9NY84 501 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 MOKQ9UQ07 419 aa3.8□□□□□ -1.8
UPF3B-203ENST00000478840 PHLPP2Q6ZVD8 1323 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 NSG1A0A0A6YYJ2 146 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 H0YC42 278 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 CCL21O00585 134 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 CRLF1O75462 422 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 SNAPINO95295 136 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 CCDC166P0CW27 439 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 ZNF24P17028 368 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 CMA1P23946 247 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 NSG1P42857 185 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 GSSP48637 474 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 P2RY4P51582 365 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 ERVK-25P63136 954 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 MARCH8Q5T0T0 291 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 C1orf146Q5VVC0 180 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 TIGD3Q6B0B8 471 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 C1orf94Q6P1W5 598 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 CCDC73Q6ZRK6 1079 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 C19orf35Q6ZS72 473 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 SSX9Q7RTT3 188 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 ZNF589Q86UQ0 364 aaPredicted RBP3.79□□□□□ -1.8
UPF3B-203ENST00000478840 SLC26A11Q86WA9 606 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 MS4A15Q8N5U1 240 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 PQLC3Q8N755 202 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 ZNF485Q8NCK3 441 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 BPIFCQ8NFQ6 507 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 NRGNQ92686 78 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 OR8B4Q96RC9 309 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 SORT1Q99523 831 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 B4GALT7Q9UBV7 327 aa3.79□□□□□ -1.8
UPF3B-203ENST00000478840 IGLV3-22A0A075B6J6 115 aa3.78□□□□□ -1.8
UPF3B-203ENST00000478840 TRAV25A0A0B4J276 109 aa3.78□□□□□ -1.8
UPF3B-203ENST00000478840 CHST1O43916 411 aa3.78□□□□□ -1.8
UPF3B-203ENST00000478840 SOX15O60248 233 aa3.78□□□□□ -1.8
UPF3B-203ENST00000478840 OR2J3O76001 311 aa3.78□□□□□ -1.8
UPF3B-203ENST00000478840 TSPAN13O95857 204 aa3.78□□□□□ -1.8
UPF3B-203ENST00000478840 CGAP01215 116 aa3.78□□□□□ -1.8
UPF3B-203ENST00000478840 CCNB1P14635 433 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms