RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 C9orf135Q5VTT2 229 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 RPS19BP1Q86WX3 136 aaKnown RBP13.1□□□□□ -0.31
NPHP4-208ENST00000478423 LAX1Q8IWV1 398 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 CA13Q8N1Q1 262 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 KIAA1958Q8N8K9 716 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 BOLLQ8N9W6 283 aaKnown RBP13.1□□□□□ -0.31
NPHP4-208ENST00000478423 CSNK2A3Q8NEV1 391 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 DUSP21Q9H596 190 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 CACNG2Q9Y698 323 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 EEF1E1-BLOC1S5C9J1V9 151 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 ERP29P30040 261 aaKnown RBP13.1□□□□□ -0.31
NPHP4-208ENST00000478423 LSSP48449 732 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 DEFA5Q01523 94 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 TGFBR3Q03167 851 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 FAM53BQ14153 422 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 SLC2A12Q8TD20 617 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 RSPRY1Q96DX4 576 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 C1orf198Q9H425 327 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 OR2A25A4D2G3 310 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 NARSO43776 548 aaKnown RBP13.09□□□□□ -0.31
NPHP4-208ENST00000478423 SERPINA5P05154 406 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 SNRPBP14678 240 aaKnown RBP13.09□□□□□ -0.31
NPHP4-208ENST00000478423 BIDP55957 195 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 CLDN17P56750 224 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 HTR4Q13639 388 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 LINC00696Q6ZRV3 163 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 STX12Q86Y82 276 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 LIX1LQ8IVB5 337 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 OR10A2Q9H208 303 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 HINT3Q9NQE9 182 aaKnown RBP13.09□□□□□ -0.31
NPHP4-208ENST00000478423 SLC6A14Q9UN76 642 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 ZNF736B4DX44 427 aaPredicted RBP13.09□□□□□ -0.31
NPHP4-208ENST00000478423 H7C417 338 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 NKG7Q16617 165 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 GLYR1Q49A26 553 aaPredicted RBP13.09□□□□□ -0.31
NPHP4-208ENST00000478423 LINC01555Q8NAE3 123 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 DRAXINQ8NBI3 349 aaPredicted RBP13.09□□□□□ -0.31
NPHP4-208ENST00000478423 ABHD4Q8TB40 342 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 POMT2Q9UKY4 750 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 KCNS2Q9ULS6 477 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 MRPL33O75394 65 aaKnown RBP13.09□□□□□ -0.31
NPHP4-208ENST00000478423 GLB1P16278 677 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 PPICP45877 212 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 CDK10Q15131 360 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 C1orf140Q5VVS0 124 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 ZNF620Q6ZNG0 422 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 NDUFAF7Q7L592 441 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 FAM26EQ8N5C1 309 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 TEAD3Q99594 435 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 RHBDD3Q9Y3P4 386 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 FAM230AA0A1W2PPH8 454 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 NUDT21O43809 227 aaKnown RBP13.09□□□□□ -0.31
NPHP4-208ENST00000478423 RP2O75695 350 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 OR7A10O76100 309 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 MRPS10P82664 201 aaKnown RBP13.09□□□□□ -0.31
NPHP4-208ENST00000478423 ECH1Q13011 328 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 MEP1BQ16820 701 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 CCDC58Q4VC31 144 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 GRINAQ7Z429 371 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 MSRB3Q8IXL7 192 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 TOMM40LQ969M1 308 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 C7orf34Q96L11 122 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 LRRC61Q9BV99 259 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 OR51B6Q9H340 312 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 PRDM7Q9NQW5 492 aa13.09□□□□□ -0.31
NPHP4-208ENST00000478423 PET100P0DJ07 73 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 EPHA4P54764 986 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 SNRPD2P62316 118 aaKnown RBP13.08□□□□□ -0.32
NPHP4-208ENST00000478423 EIF4EBP2Q13542 120 aaPredicted RBP13.08□□□□□ -0.32
NPHP4-208ENST00000478423 STK11Q15831 433 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 BEND4Q6ZU67 534 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 OR13C9Q8NGT0 318 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 BRIX1Q8TDN6 353 aaKnown RBP13.08□□□□□ -0.32
NPHP4-208ENST00000478423 MVB12AQ96EY5 273 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 UTP23Q9BRU9 249 aaKnown RBP13.08□□□□□ -0.32
NPHP4-208ENST00000478423 TREM1Q9NP99 234 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 MBD1Q9UIS9 605 aaPredicted RBP13.08□□□□□ -0.32
NPHP4-208ENST00000478423 NCOR1O75376 2440 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 ZAR1LA6NP61 321 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 H0YIG0 161 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 EIF4E2O60573 245 aaKnown RBP13.08□□□□□ -0.32
NPHP4-208ENST00000478423 MYF5P13349 255 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 CD46P15529 392 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 GIFP27352 417 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 FASLGP48023 281 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 COL28A1Q2UY09 1125 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 AAED1Q7RTV5 226 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 LINC00346Q8IVM7 164 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 OR52N1Q8NH53 320 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 KCTD12Q96CX2 325 aaKnown RBP13.08□□□□□ -0.32
NPHP4-208ENST00000478423 HYLS1Q96M11 299 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 OR2B2Q9GZK3 357 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 WDR76Q9H967 626 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 PLEKHJ1Q9NW61 149 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 A0A087WV62 115 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 PRAMEF25A6NGN4 478 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 SBK2P0C263 348 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 CLEC2LP0C7M8 214 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 APEX1P27695 318 aaKnown RBP13.08□□□□□ -0.32
NPHP4-208ENST00000478423 SOWAHCQ53LP3 525 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms