RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CLIP4Q8N3C7 705 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 GPR137CQ8N3F9 429 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 ZIC4Q8N9L1 334 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 ZNF540Q8NDQ6 660 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 PIK3C3Q8NEB9 887 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 GTF2H4Q92759 462 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC25A36Q96CQ1 311 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 FBXO17Q96EF6 278 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 C7orf26Q96N11 449 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 OR52B2Q96RD2 323 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 ZNF607Q96SK3 696 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 TMEM160Q9NX00 188 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 TESQ9UGI8 421 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 PCDHB14Q9Y5E9 798 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 HEATR5AQ86XA9 2040 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 B9A039 149 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 SERPINB7O75635 380 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 PRG2P13727 222 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 USF1P22415 310 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 SERPINF1P36955 418 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 RPS5P46782 204 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 GZMKP49863 264 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 SELENOPP49908 381 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 P2RY4P51582 365 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 ROR2Q01974 943 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 GTDC1Q4AE62 458 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 CYB5R2Q6BCY4 276 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 REEP3Q6NUK4 255 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 LSMEM1Q8N8F7 131 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 OR9I1Q8NGQ6 314 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 LRRC8CQ8TDW0 803 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 C10orf105Q8TEF2 133 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 TLCD1Q96CP7 247 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 OXGR1Q96P68 337 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 KCNK17Q96T54 332 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 MDFIQ99750 246 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 PAIP1Q9H074 479 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 B3GAT2Q9NPZ5 323 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 CA10Q9NS85 328 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 CORINQ9Y5Q5 1042 aa12.61□□□□□ -0.39
SMARCE1-209ENST00000478349 FREM1Q5H8C1 2179 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 TRAV36DV7A0A075B6V5 113 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 IGHV1-18A0A0C4DH31 117 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 EVPLLA8MZ36 301 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 RPL36A-HNRNPH2H7BZ11 118 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 FAM157CP0CG43 387 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 NQO1P15559 274 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 HNF1AP20823 631 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 ARR3P36575 388 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 CLDN17P56750 224 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 ALG10BQ5I7T1 473 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 SWT1Q5T5J6 900 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 FAM91A1Q658Y4 838 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 ULK3Q6PHR2 472 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 DHRS4L2Q6PKH6 230 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC2A7Q6PXP3 512 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 EPGNQ6UW88 154 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 MAVSQ7Z434 540 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 RANBP3LQ86VV4 465 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 EPHX4Q8IUS5 362 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 ADPRHL1Q8NDY3 354 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 IL17RDQ8NFM7 739 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 OR6S1Q8NH40 331 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 TMEM158Q8WZ71 300 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 BCL2L2Q92843 193 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 ZBTB9Q96C00 473 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC47A1Q96FL8 570 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 ANKRD27Q96NW4 1050 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 REPIN1Q9BWE0 567 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 ASPNQ9BXN1 380 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 BEX2Q9BXY8 128 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 SHARPINQ9H0F6 387 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 RABEP2Q9H5N1 569 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 TMEM27Q9HBJ8 222 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 TMBIM4Q9HC24 238 aa12.6□□□□□ -0.39
SMARCE1-209ENST00000478349 LOC390937A0A1W2PQ73 354 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 RNF212BA8MTL3 300 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 FTCDNL1E5RQL4 147 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 NR5A2O00482 541 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 ENTPD5O75356 428 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 ARAFP10398 606 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC6A2P23975 617 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 PPOXP50336 477 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 RGS8P57771 180 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 CDK6Q00534 326 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 NAAAQ02083 359 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 EFNB3Q15768 340 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 SWI5Q1ZZU3 235 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 LRIF1Q5T3J3 769 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 H1FNTQ75WM6 255 aaPredicted RBP12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 UEVLDQ8IX04 471 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 NUP37Q8NFH4 326 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 NFKBIDQ8NI38 313 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 RNF217Q8TC41 542 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 DYDC1Q8WWB3 177 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 NANOS1Q8WY41 292 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 HTRA1Q92743 480 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 MAL2Q969L2 176 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 SPDL1Q96EA4 605 aa12.59□□□□□ -0.39
SMARCE1-209ENST00000478349 VRK1Q99986 396 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms