RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 CHST2Q9Y4C5 530 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 IGHV4-61A0A0C4DH41 118 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 LOC100289279A0A1B0GTE1 492 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 TMEM247A6NEH6 219 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 UPK3AO75631 287 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 ZNF432O94892 652 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 AHSA1O95433 338 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 OR4A8P0C604 315 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 PNMTP11086 282 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 BMP2P12643 396 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 PRG2P13727 222 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 APEHP13798 732 aaKnown RBP11.28□□□□□ -0.6
ABCF3-212ENST00000478288 NCF2P19878 526 aaPredicted RBP11.28□□□□□ -0.6
ABCF3-212ENST00000478288 CRATP43155 626 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 IDH3GP51553 393 aaPredicted RBP11.28□□□□□ -0.6
ABCF3-212ENST00000478288 POU3F1Q03052 451 aaPredicted RBP11.28□□□□□ -0.6
ABCF3-212ENST00000478288 BNIP2Q12982 314 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 FAM120AOSQ5T036 256 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 NIPAL3Q6P499 406 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 SERPINA11Q86U17 422 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 CCDC36Q8IYA8 594 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 CLIP4Q8N3C7 705 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 TMEM19Q96HH6 336 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 FOXN4Q96NZ1 517 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 PTDSS2Q9BVG9 487 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 RAB1BQ9H0U4 201 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 BCL2L10Q9HD36 194 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 TENM1Q9UKZ4 2725 aa11.28□□□□□ -0.6
ABCF3-212ENST00000478288 LOC102725191A0A1B0GVB3 256 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 VSTM5A8MXK1 200 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 OR2T1O43869 369 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 ANP32DO95626 131 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 ERCC1P07992 297 aaPredicted RBP11.27□□□□□ -0.61
ABCF3-212ENST00000478288 CBR1P16152 277 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 ZNF43P17038 809 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 GTF2E2P29084 291 aaKnown RBP11.27□□□□□ -0.61
ABCF3-212ENST00000478288 ARR3P36575 388 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 SLC18A1P54219 525 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 ROR2Q01974 943 aaKnown RBP11.27□□□□□ -0.61
ABCF3-212ENST00000478288 EGR4Q05215 589 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 LGALS3BPQ08380 585 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 FADDQ13158 208 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 ARIH2OSQ8N7S6 290 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 LSMEM1Q8N8F7 131 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 ADPRHL1Q8NDY3 354 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 IL17RDQ8NFM7 739 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 NEU4Q8WWR8 484 aaPredicted RBP11.27□□□□□ -0.61
ABCF3-212ENST00000478288 HPS1Q92902 700 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 ITCHQ96J02 903 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 ANKRD27Q96NW4 1050 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 VRK1Q99986 396 aaPredicted RBP11.27□□□□□ -0.61
ABCF3-212ENST00000478288 BPESC1Q9GZL8 116 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 RAD21L1Q9H4I0 556 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 WDR55Q9H6Y2 383 aaPredicted RBP11.27□□□□□ -0.61
ABCF3-212ENST00000478288 KCNK9Q9NPC2 374 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 A4GALTQ9NPC4 353 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 B3GAT1Q9P2W7 334 aa11.27□□□□□ -0.61
ABCF3-212ENST00000478288 SLC35F4A4IF30 521 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 NR5A2O00482 541 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 AIM2O14862 343 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 AKAP8O43823 692 aaKnown RBP11.26□□□□□ -0.61
ABCF3-212ENST00000478288 SLC43A1O75387 559 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 TACSTD2P09758 323 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 ETS2P15036 469 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 CALCRP30988 508 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 SQLEQ14534 574 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 ZNF311Q5JNZ3 666 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 RPS26P11Q5JNZ5 115 aaPredicted RBP11.26□□□□□ -0.61
ABCF3-212ENST00000478288 CEP85LQ5SZL2 805 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 FAM69AQ5T7M9 428 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 HHATQ5VTY9 493 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 ATG16L1Q676U5 607 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 NET1Q7Z628 596 aaPredicted RBP11.26□□□□□ -0.61
ABCF3-212ENST00000478288 LSRQ86X29 649 aaPredicted RBP11.26□□□□□ -0.61
ABCF3-212ENST00000478288 ANKS4BQ8N8V4 417 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 PIK3C3Q8NEB9 887 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 BBS10Q8TAM1 723 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 VPS33AQ96AX1 596 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 KTI12Q96EK9 354 aaPredicted RBP11.26□□□□□ -0.61
ABCF3-212ENST00000478288 OXGR1Q96P68 337 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 PAIP2Q9BPZ3 127 aaKnown RBP11.26□□□□□ -0.61
ABCF3-212ENST00000478288 C19orf24Q9BVV8 132 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 CHODLQ9H9P2 273 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 PCDHB14Q9Y5E9 798 aa11.26□□□□□ -0.61
ABCF3-212ENST00000478288 WNK2Q9Y3S1 2297 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 A0A096LPE4 126 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 A0A1W2PPZ6 126 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 ZNF99A8MXY4 864 aaPredicted RBP11.25□□□□□ -0.61
ABCF3-212ENST00000478288 hCG_2039718K7EN88 272 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 STAMBPO95630 424 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 NPR2P20594 1047 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 PRKAR1BP31321 381 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 RPS5P46782 204 aaKnown RBP11.25□□□□□ -0.61
ABCF3-212ENST00000478288 MRPL19P49406 292 aaKnown RBP11.25□□□□□ -0.61
ABCF3-212ENST00000478288 POLR2JP52435 117 aaKnown RBP11.25□□□□□ -0.61
ABCF3-212ENST00000478288 CLDN17P56750 224 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 WDR4P57081 412 aaKnown RBP11.25□□□□□ -0.61
ABCF3-212ENST00000478288 HGFACQ04756 655 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 MFSD13AQ14CX5 517 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 RGNQ15493 299 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms