RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 MROH9Q5TGP6 573 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 ANKRD26P1Q6NSI1 321 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 Q6YL49 198 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 CREB3L2Q70SY1 520 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF771Q7L3S4 317 aaPredicted RBP6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 SZRD1Q7Z422 152 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 GRINAQ7Z429 371 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 CCDC36Q8IYA8 594 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 PARP8Q8N3A8 854 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 TMEM151AQ8N4L1 468 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 TMEM86BQ8N661 226 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 TMEM99Q8N816 258 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 METTL6Q8TCB7 284 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 ST7LQ8TDW4 575 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 FAM120BQ96EK7 910 aaKnown RBP6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF764Q96H86 408 aaPredicted RBP6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 MRI1Q9BV20 369 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 NMUR2Q9GZQ4 415 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 VPS11Q9H270 941 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 SERHL2Q9H4I8 314 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 MARCH7Q9H992 704 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 HINT3Q9NQE9 182 aaKnown RBP6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 TNFRSF19Q9NS68 423 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 NOX1Q9Y5S8 564 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 ARHGAP32A7KAX9 2087 aa6.18□□□□□ -1.42
SPTLC1-205ENST00000477888 NOTCH3Q9UM47 2321 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 DNAH9Q9NYC9 4486 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 IGLV3-9A0A075B6K5 115 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 A0A1W2PPW3 197 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 ZC3H12DA2A288 527 aaKnown RBP6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 AGAP5A6NIR3 686 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 AQP7P3A6NL99 342 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 H0YL77 283 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 PIP5K1CO60331 668 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 FCMRO60667 390 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 BCAS1O75363 584 aaPredicted RBP6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 PEX14O75381 377 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF432O94892 652 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 AKR7A3O95154 331 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 CLPTM1O96005 669 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 SBK3P0C264 359 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 UBTFL6P0CB48 400 aaPredicted RBP6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF14P17017 642 aaPredicted RBP6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 PGM1P36871 562 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 SLC6A9P48067 706 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 RPS23P62266 143 aaKnown RBP6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 KIAA0040Q15053 153 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 RASA2Q15283 850 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 GKAP1Q5VSY0 366 aaPredicted RBP6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 PRAMEF8Q5VWM4 474 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 PRAMEF7Q5VXH5 474 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 NOXRED1Q6NXP6 359 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 TMEM154Q6P9G4 183 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF620Q6ZNG0 422 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 LIAT1Q6ZQX7 453 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 USP51Q70EK9 711 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 GPAT4Q86UL3 456 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 EPHX4Q8IUS5 362 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 CMIPQ8IY22 773 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 FAM71CQ8NEG0 241 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 FAM76AQ8TAV0 307 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 CCL17Q92583 94 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 SGCDQ92629 289 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 PMM1Q92871 262 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 UPRTQ96BW1 309 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF837Q96EG3 531 aaPredicted RBP6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 CHMP6Q96FZ7 201 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 TSPAN32Q96QS1 320 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF382Q96SR6 550 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 SDF2Q99470 211 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 ACSS3Q9H6R3 686 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 ZFAND3Q9H8U3 227 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 NOX4Q9NPH5 578 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 SIRT3Q9NTG7 399 aaPredicted RBP6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 UBAP1Q9NZ09 502 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 TAAR3PQ9P1P4 343 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 PCDHGB4Q9UN71 923 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 POLR3HQ9Y535 204 aaPredicted RBP6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 TIMM22Q9Y584 194 aa6.17□□□□□ -1.42
SPTLC1-205ENST00000477888 TMED7-TICAM2A0A0A6YYA0 188 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 TMEM72A0PK05 275 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 LIPT2A6NK58 231 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 A8MXK9 166 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 TBX19O60806 448 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 SMIM24O75264 130 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 UGT2B17O75795 530 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 UBOX5O94941 541 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 PPP1R3DO95685 299 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 CSTAP01040 98 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 HLA-HP01893 362 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 GSTA2P09210 222 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 MYZAPP0CAP1 466 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 FAM157BP0CG42 384 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF250P15622 560 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 HMOX2P30519 316 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 RYKP34925 604 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 GIPRP48546 466 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 MAP2K6P52564 334 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 SEC61A1P61619 476 aaKnown RBP6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 PAX2Q02962 417 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms