RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PAPLNO95428 1278 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 RAB36O95755 333 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 CD79AP11912 226 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 SIM1P81133 766 aaPredicted RBP11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 PTSQ03393 145 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 TLE4Q04727 773 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 EGR3Q06889 387 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 OR2F1Q13607 317 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 RBM39Q14498 530 aaKnown RBP11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 TMEM215Q68D42 235 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 ULK3Q6PHR2 472 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 SLC36A4Q6YBV0 504 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 MFSD9Q8NBP5 474 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 FAM210BQ96KR6 192 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 F2RL3Q96RI0 385 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 COPS8Q99627 209 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 ZNF2Q9BSG1 426 aaPredicted RBP11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 LRRN3Q9H3W5 708 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 BEX1Q9HBH7 125 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 DNAJB11Q9UBS4 358 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 FTSJ1Q9UET6 329 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 TCFL5Q9UL49 500 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 SLC27A6Q9Y2P4 619 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 A0A087WUJ7 227 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 UBE2QL1A1L167 161 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 A6NLC8 198 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 IQCF5A8MTL0 148 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 CTDSPLO15194 276 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 SLC25A14O95258 325 aaPredicted RBP11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 ACHEP22303 614 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 KDELR2P33947 212 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 SPINT3P49223 89 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 RAP1BP61224 184 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 PJVKQ0ZLH3 352 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 TMEM115Q12893 351 aaPredicted RBP11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 PNLIPRP3Q17RR3 467 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 GFOD2Q3B7J2 385 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 C9orf50Q5SZB4 431 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 TMIGD1Q6UXZ0 262 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 P4HA3Q7Z4N8 544 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 LRRTM1Q86UE6 522 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 ARIH2OSQ8N7S6 290 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 C12orf76Q8N812 135 aaPredicted RBP11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 TERB2Q8NHR7 220 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 CYB5D2Q8WUJ1 264 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 SMARCD2Q92925 531 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 MRGPRX3Q96LB0 322 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 C5orf34Q96MH7 638 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 OR14A2Q96R54 314 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 TMEM100Q9NV29 134 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 TAS2R10Q9NYW0 307 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 LUZP4Q9P127 313 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 B4GALT6Q9UBX8 382 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 IL36AQ9UHA7 158 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 TMED3Q9Y3Q3 217 aa11.66□□□□□ -0.54
RTFDC1-207ENST00000477573 IRGMA1A4Y4 181 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 ZNF726A6NNF4 738 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 LEFTY1O75610 366 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 MT-ND4P03905 459 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 EIF4EP06730 217 aaKnown RBP11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 EBLN1P0CF75 366 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 ART1P52961 327 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 NRG3P56975 720 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 NRROSQ86YC3 692 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 GCNT2Q8N0V5 402 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 FAM160A2Q8N612 972 aaPredicted RBP11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 ZBTB2Q8N680 514 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 NUDT10Q8NFP7 164 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 OR1N1Q8NGS0 311 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 PIGXQ8TBF5 258 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 THEM6Q8WUY1 208 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 GAL3ST3Q96A11 431 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 NSUN5Q96P11 429 aaKnown RBP11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 BOCQ9BWV1 1114 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 LAT2Q9GZY6 243 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 TIMM10BQ9Y5J6 103 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 TSPAN11A1L157 253 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 OR5H15A6NDH6 313 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 OR5H1A6NKK0 313 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 UPK3BL1B0FP48 263 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 UPK3BL2E5RIL1 263 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 M0R129 80 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 WNT1P04628 370 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 CISD3P0C7P0 127 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 CD46P15529 392 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 HTR2CP28335 458 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 PPM1FP49593 454 aaPredicted RBP11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 IDH3GP51553 393 aaPredicted RBP11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 RAB8AP61006 207 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 IL10RAQ13651 578 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 ZNF805Q5CZA5 627 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 ATAT1Q5SQI0 421 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 JMJD6Q6NYC1 403 aaPredicted RBP11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 Q6ZSR9 355 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 THNSL2Q86YJ6 484 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 CLDN19Q8N6F1 224 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 OR4C15Q8NGM1 316 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 OR4A4PQ8NGN8 299 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 RIOK2Q9BVS4 552 aaKnown RBP11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 RERGLQ9H628 205 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms