RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 NELFAQ9H3P2 528 aa9.89□□□□□ -0.83
HDLBP-236ENST00000477477 MOV10Q9HCE1 1003 aaKnown RBP9.89□□□□□ -0.83
HDLBP-236ENST00000477477 RCE1Q9Y256 329 aa9.89□□□□□ -0.83
HDLBP-236ENST00000477477 A0A096LPE4 126 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 A0A1W2PPZ6 126 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 B9A039 149 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 RPL36A-HNRNPH2H7BZ11 118 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 NR5A2O00482 541 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 FZD7O75084 574 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 ZNF432O94892 652 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 IGKV3-15P01624 115 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 NUDT7P0C024 238 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 HOXB1P14653 301 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-236ENST00000477477 GTF2E2P29084 291 aaKnown RBP9.88□□□□□ -0.83
HDLBP-236ENST00000477477 RPS5P46782 204 aaKnown RBP9.88□□□□□ -0.83
HDLBP-236ENST00000477477 POLR2JP52435 117 aaKnown RBP9.88□□□□□ -0.83
HDLBP-236ENST00000477477 CLDN17P56750 224 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 HOXC5Q00444 222 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 ROR2Q01974 943 aaKnown RBP9.88□□□□□ -0.83
HDLBP-236ENST00000477477 EGR4Q05215 589 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 RGNQ15493 299 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 EFNB3Q15768 340 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 ADIPOQQ15848 244 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 GLIPR1L2Q4G1C9 344 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 ZNF311Q5JNZ3 666 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 ANKRD16Q6P6B7 361 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 C6orf89Q6UWU4 347 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 SLC46A3Q7Z3Q1 461 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 KDM8Q8N371 416 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 FAM169BQ8N8A8 192 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 ANKS4BQ8N8V4 417 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 BBS10Q8TAM1 723 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 GTF2H4Q92759 462 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 SLC25A36Q96CQ1 311 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 KTI12Q96EK9 354 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-236ENST00000477477 OR52B2Q96RD2 323 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 SHARPINQ9H0F6 387 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 PLK3Q9H4B4 646 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 SEC61A2Q9H9S3 476 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 BCL2L10Q9HD36 194 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 MYOZ1Q9NP98 299 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-236ENST00000477477 A4GALTQ9NPC4 353 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 B3GAT1Q9P2W7 334 aa9.88□□□□□ -0.83
HDLBP-236ENST00000477477 IGHV4-61A0A0C4DH41 118 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 LOC390937A0A1W2PQ73 354 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 UBDO15205 165 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 SLC43A1O75387 559 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 OR4A8P0C604 315 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 BMP2P12643 396 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 ZNF43P17038 809 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 HOXB9P17482 250 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-236ENST00000477477 IGFBP5P24593 272 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 CALCRP30988 508 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 PPOXP50336 477 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 SLC18A1P54219 525 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 FADDQ13158 208 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 FAM166AQ6J272 317 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 VHLLQ6RSH7 139 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 MIER2Q8N344 545 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 ARIH2OSQ8N7S6 290 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 ANKK1Q8NFD2 765 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 NUP37Q8NFH4 326 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 OR4F15Q8NGB8 312 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 MAL2Q969L2 176 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 FOXN4Q96NZ1 517 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 VRK1Q99986 396 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-236ENST00000477477 PRR14Q9BWN1 585 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 PAIP1Q9H074 479 aaKnown RBP9.87□□□□□ -0.83
HDLBP-236ENST00000477477 RAD21L1Q9H4I0 556 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 ZNF442Q9H7R0 627 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 C12orf10Q9HB07 376 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 SEC14L4Q9UDX3 406 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 KCNS2Q9ULS6 477 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 PCDHB14Q9Y5E9 798 aa9.87□□□□□ -0.83
HDLBP-236ENST00000477477 SVEP1Q4LDE5 3571 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 IGKV1D-42A0A075B6H8 117 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 LOC100289279A0A1B0GTE1 492 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 SLC35F4A4IF30 521 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 M0R082 166 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 CLIC1O00299 241 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 AIM2O14862 343 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 OR2T1O43869 369 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 CELA3BP08861 270 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 APEHP13798 732 aaKnown RBP9.86□□□□□ -0.83
HDLBP-236ENST00000477477 CBR1P16152 277 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 PRKAR1BP31321 381 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 THBS2P35442 1172 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 ARF1P84077 181 aaKnown RBP9.86□□□□□ -0.83
HDLBP-236ENST00000477477 HGFACQ04756 655 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 C1DQ13901 141 aaKnown RBP9.86□□□□□ -0.83
HDLBP-236ENST00000477477 CARTPTQ16568 116 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 KRTAP24-1Q3LI83 254 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 FAM69AQ5T7M9 428 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 ARFGEF3Q5TH69 2177 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 SLC2A7Q6PXP3 512 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 C5orf46Q6UWT4 87 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 MYPOPQ86VE0 399 aaPredicted RBP9.86□□□□□ -0.83
HDLBP-236ENST00000477477 LSMEM1Q8N8F7 131 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 ZNF417Q8TAU3 575 aa9.86□□□□□ -0.83
HDLBP-236ENST00000477477 SLC38A4Q969I6 547 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms