RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 GPR6P46095 362 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 POLR2HP52434 150 aaKnown RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 UBE2NP61088 152 aaKnown RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 EPS8Q12929 822 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 ALKBH6Q3KRA9 238 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 LSM12Q3MHD2 195 aaKnown RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 C3orf36Q3SXR2 165 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 AVPI1Q5T686 147 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 SAXO2Q658L1 398 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 C16orf62Q7Z3J2 963 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 MAGEE2Q8TD90 523 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 GTF3AQ92664 365 aaKnown RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 DVL3Q92997 716 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 MRPL24Q96A35 216 aaKnown RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 DDIT4LQ96D03 193 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 KCNS3Q9BQ31 491 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 NAA11Q9BSU3 229 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 RBM4Q9BWF3 364 aaKnown RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 SF3B5Q9BWJ5 86 aaKnown RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 RSPO3Q9BXY4 272 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 GRPEL1Q9HAV7 217 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 ADPRHL2Q9NX46 363 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 B3GNT2Q9NY97 397 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 ZNF224Q9NZL3 707 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 PSMC3IPQ9P2W1 217 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 B3GAT1Q9P2W7 334 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 REV1Q9UBZ9 1251 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 PCDHGB4Q9UN71 923 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 SLC35A3Q9Y2D2 325 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 CHST2Q9Y4C5 530 aa8.36□□□□□ -1.07
COL4A5-204ENST00000477429 SOX21Q9Y651 276 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-204ENST00000477429 AGAP5A6NIR3 686 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 A6NJY4 79 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 HMGN4O00479 90 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 FRS3O43559 492 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 NPIPB7O75200 414 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 KRT33AO76009 404 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 CPSF4O95639 269 aaKnown RBP8.35□□□□□ -1.07
COL4A5-204ENST00000477429 PNPP00491 289 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 AK1P00568 194 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 NAT2P11245 290 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 NR4A1P22736 598 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 ZFP36P26651 326 aaKnown RBP8.35□□□□□ -1.07
COL4A5-204ENST00000477429 ALDH3A1P30838 453 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 SRSF4Q08170 494 aaKnown RBP8.35□□□□□ -1.07
COL4A5-204ENST00000477429 DAG1Q14118 895 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 MRPL2Q5T653 305 aaKnown RBP8.35□□□□□ -1.07
COL4A5-204ENST00000477429 SHQ1Q6PI26 577 aaKnown RBP8.35□□□□□ -1.07
COL4A5-204ENST00000477429 ZNF771Q7L3S4 317 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-204ENST00000477429 C1QL2Q7Z5L3 287 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 GSPT2Q8IYD1 628 aaKnown RBP8.35□□□□□ -1.07
COL4A5-204ENST00000477429 C4orf33Q8N1A6 199 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 RIBC1Q8N443 379 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-204ENST00000477429 FAM169BQ8N8A8 192 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 FGFBP3Q8TAT2 258 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 MOAP1Q96BY2 351 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 LRRC58Q96CX6 371 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 TSPAN32Q96QS1 320 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 PTDSS2Q9BVG9 487 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 CRLF2Q9HC73 371 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 GPR35Q9HC97 309 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 ZDHHC2Q9UIJ5 367 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 GRIP1Q9Y3R0 1128 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 PCDHB14Q9Y5E9 798 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 CACNG2Q9Y698 323 aa8.35□□□□□ -1.07
COL4A5-204ENST00000477429 LOC100653049A0A140TA62 436 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 DUXAA6NLW8 204 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 TMEM114B3SHH9 223 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 FTCDNL1E5RQL4 147 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 RPL36A-HNRNPH2H7BZ11 118 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 PPIHO43447 177 aaKnown RBP8.34□□□□□ -1.07
COL4A5-204ENST00000477429 SYNGR3O43761 229 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 CDC14BO60729 498 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 KRT34O76011 436 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 GPIP06744 558 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 GUSBP08236 651 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 HKR1P10072 659 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 ZNF35P13682 527 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 RPS4Y1P22090 263 aaKnown RBP8.34□□□□□ -1.07
COL4A5-204ENST00000477429 AQP5P55064 265 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 CLDN8P56748 225 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 CLDN17P56750 224 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 PSMA6P60900 246 aaKnown RBP8.34□□□□□ -1.07
COL4A5-204ENST00000477429 HOXC5Q00444 222 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 MVKQ03426 396 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 EGR4Q05215 589 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 PIGFQ07326 219 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 FXNQ16595 210 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 CEACAM16Q2WEN9 425 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 CCDC153Q494R4 210 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 GPAT3Q53EU6 434 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 C1QTNF12Q5T7M4 302 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 TMEM225Q6GV28 225 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 TREML4Q6UXN2 200 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 VRK2Q86Y07 508 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 BCL6BQ8N143 479 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-204ENST00000477429 SIGLECL1Q8N7X8 197 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 CCDC63Q8NA47 563 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 FNDC5Q8NAU1 212 aa8.34□□□□□ -1.07
COL4A5-204ENST00000477429 OR4A15Q8NGL6 344 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms