RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 INIPQ9NRY2 104 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 RBM7Q9Y580 266 aaKnown RBP10.14□□□□□ -0.79
COL27A1-204ENST00000477421 SCN5AQ14524 2016 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 C2CD4DB7Z1M9 353 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF878C9JN71 531 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 DCNP07585 359 aaKnown RBP10.14□□□□□ -0.79
COL27A1-204ENST00000477421 OR2T7P0C7T2 308 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 CRYBB2P43320 205 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 CDNFQ49AH0 187 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 LIPNQ5VXI9 398 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 QSOX2Q6ZRP7 698 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 VASH1Q7L8A9 365 aaPredicted RBP10.14□□□□□ -0.79
COL27A1-204ENST00000477421 ZAR1Q86SH2 424 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 LINC00346Q8IVM7 164 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 PM20D2Q8IYS1 436 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 POGLUT1Q8NBL1 392 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 OR2T27Q8NH04 317 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 OR51J1Q9H342 316 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 IL20Q9NYY1 176 aa10.14□□□□□ -0.79
COL27A1-204ENST00000477421 NPIPB8E9PQR5 432 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF593O00488 134 aaPredicted RBP10.13□□□□□ -0.79
COL27A1-204ENST00000477421 ARSBP15848 533 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 TPBGQ13641 420 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 GLYR1Q49A26 553 aaPredicted RBP10.13□□□□□ -0.79
COL27A1-204ENST00000477421 DMRTC1Q5HYR2 192 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 COQ8AQ8NI60 647 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 FCRL1Q96LA6 429 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 LMF2Q9BU23 707 aaKnown RBP10.13□□□□□ -0.79
COL27A1-204ENST00000477421 ARL6Q9H0F7 186 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 TSPAN10Q9H1Z9 355 aaPredicted RBP10.13□□□□□ -0.79
COL27A1-204ENST00000477421 ANKRD19PQ9H560 264 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 BCAT2O15382 392 aaPredicted RBP10.13□□□□□ -0.79
COL27A1-204ENST00000477421 THBS1P07996 1170 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 CD14P08571 375 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 HLA-DMAP28067 261 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 KIR2DL1P43626 348 aaPredicted RBP10.13□□□□□ -0.79
COL27A1-204ENST00000477421 CXCL12P48061 93 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 C21orf58P58505 322 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 GLO1Q04760 184 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 TDGQ13569 410 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 YOD1Q5VVQ6 348 aaPredicted RBP10.13□□□□□ -0.79
COL27A1-204ENST00000477421 CCDC120Q96HB5 630 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 LHX9Q9NQ69 397 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 RALGAPA2Q2PPJ7 1873 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 PRAMEF27A3QJZ7 478 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 HRKO00198 91 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF749O43361 778 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 IFNA7P01567 189 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 AMY2AP04746 511 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 FCN2Q15485 313 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 MEP1BQ16820 701 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF425Q6IV72 752 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 APOOLQ6UXV4 268 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 SIAH3Q8IW03 269 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 BCORP1Q8N888 145 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 SUN5Q8TC36 379 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 ADAMTS18Q8TE60 1221 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 LCORQ96JN0 433 aaPredicted RBP10.13□□□□□ -0.79
COL27A1-204ENST00000477421 EMC6Q9BV81 110 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 EVA1BQ9NVM1 165 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 GSKIPQ9P0R6 139 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 UPB1Q9UBR1 384 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF281Q9Y2X9 895 aa10.13□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF236Q9UL36 1845 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 SPTY2D1-AS1A0A0U1RR47 76 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 ARRDC5A6NEK1 342 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 CREBL2O60519 120 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-204ENST00000477421 GDNFP39905 211 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 CDK5Q00535 292 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 GALEQ14376 348 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 LINC00299Q6ZSB3 139 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 SLC25A44Q96H78 314 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-204ENST00000477421 TXNDC15Q96J42 360 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 STACQ99469 402 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 HCAR1Q9BXC0 346 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 PLSCR3Q9NRY6 295 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 QPCTLQ9NXS2 382 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 NCDNQ9UBB6 729 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 HS3ST3A1Q9Y663 406 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 NBASA2RRP1 2371 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 E9PI62 339 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 ARPC5O15511 151 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 FABP7O15540 132 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 PTHLHP12272 177 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 GNG2P59768 71 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 EEF1A2Q05639 463 aaKnown RBP10.12□□□□□ -0.79
COL27A1-204ENST00000477421 RAB11BQ15907 218 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 SLC25A35Q3KQZ1 300 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 FAAP20Q6NZ36 180 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 RPL22L1Q6P5R6 122 aaKnown RBP10.12□□□□□ -0.79
COL27A1-204ENST00000477421 OR51D1Q8NGF3 324 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 HYLS1Q96M11 299 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 MED11Q9P086 117 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 PFDN2Q9UHV9 154 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF346Q9UL40 294 aaKnown RBP10.12□□□□□ -0.79
COL27A1-204ENST00000477421 POLHQ9Y253 713 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 TRBV11-1A0A0K0K1C0 115 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 TLCD2A6NGC4 264 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 F5H5K5 113 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 F10P00742 488 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms