RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 OR6S1Q8NH40 331 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 MFSD8Q8NHS3 518 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 DDIT4LQ96D03 193 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 TMEM80Q96HE8 168 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 TSPAN32Q96QS1 320 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 NMNAT3Q96T66 252 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 TUBA1CQ9BQE3 449 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 NAA50Q9GZZ1 169 aaKnown RBP13.01□□□□□ -0.33
COL4A6-206ENST00000477085 ZNF552Q9H707 407 aaPredicted RBP13.01□□□□□ -0.33
COL4A6-206ENST00000477085 MRPL39Q9NYK5 338 aaKnown RBP13.01□□□□□ -0.33
COL4A6-206ENST00000477085 RIIAD1A6NNX1 92 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 PRR23D1E9PI22 279 aaPredicted RBP13□□□□□ -0.33
COL4A6-206ENST00000477085 C11orf98E9PRG8 122 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 J3QRE1 110 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 FZD7O75084 574 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 TXNDC12O95881 172 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 GYPBP06028 91 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 PRR23D2P0DMB1 279 aaPredicted RBP13□□□□□ -0.33
COL4A6-206ENST00000477085 ADORA3P0DMS8 318 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 TFPIP10646 304 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 HLA-DOBP13765 273 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 EIF1P41567 113 aaKnown RBP13□□□□□ -0.33
COL4A6-206ENST00000477085 MAP2K6P52564 334 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 TBCEQ15813 527 aaPredicted RBP13□□□□□ -0.33
COL4A6-206ENST00000477085 UBE2UQ5VVX9 321 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 MEPCEQ7L2J0 689 aaKnown RBP13□□□□□ -0.33
COL4A6-206ENST00000477085 WDFY1Q8IWB7 410 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 OR4F15Q8NGB8 312 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 OR9Q1Q8NGQ5 310 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 DGCR14Q96DF8 476 aaKnown RBP13□□□□□ -0.33
COL4A6-206ENST00000477085 NXPE2Q96DL1 559 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 OR5M11Q96RB7 305 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 ZNF649Q9BS31 505 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 FGF20Q9NP95 211 aaPredicted RBP13□□□□□ -0.33
COL4A6-206ENST00000477085 TIMMDC1Q9NPL8 285 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 NDUFA13Q9P0J0 144 aa13□□□□□ -0.33
COL4A6-206ENST00000477085 ZNF346Q9UL40 294 aaKnown RBP13□□□□□ -0.33
COL4A6-206ENST00000477085 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13□□□□□ -0.33
COL4A6-206ENST00000477085 FRYQ5TBA9 3013 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 A0A1W2PNR3 127 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 OR2M5A3KFT3 312 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 FAM47E-STBD1D6RA91 191 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 IDH3BO43837 385 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 APEHP13798 732 aaKnown RBP12.99□□□□□ -0.33
COL4A6-206ENST00000477085 ZNF3P17036 446 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 KLK2P20151 261 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 IDUAP35475 653 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 ETV1P50549 477 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 C3orf33Q6P1S2 294 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 SULF2Q8IWU5 870 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 SVOPQ8N4V2 548 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 FAM98AQ8NCA5 519 aaKnown RBP12.99□□□□□ -0.33
COL4A6-206ENST00000477085 MDS2Q8NDY4 140 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 OR2M7Q8NG81 312 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 RORBQ92753 470 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 RFKQ969G6 155 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 TEAD3Q99594 435 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 NMNAT2Q9BZQ4 307 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 OR51V1Q9H2C8 321 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 SERINC1Q9NRX5 453 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 DIMT1Q9UNQ2 313 aaKnown RBP12.99□□□□□ -0.33
COL4A6-206ENST00000477085 EXOGQ9Y2C4 368 aaKnown RBP12.99□□□□□ -0.33
COL4A6-206ENST00000477085 ZNF814B7Z6K7 855 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 TLX3O43711 291 aaPredicted RBP12.99□□□□□ -0.33
COL4A6-206ENST00000477085 AKR7A3O95154 331 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 SDHAP31040 664 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 SFTPDP35247 375 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 P2RY4P51582 365 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 CCL11P51671 97 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 RRADP55042 308 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 RAB40BQ12829 278 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 SELENBP1Q13228 472 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 TMEM176BQ3YBM2 270 aaPredicted RBP12.99□□□□□ -0.33
COL4A6-206ENST00000477085 KLHL12Q53G59 568 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 MESTQ5EB52 335 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 AGAP7PQ5VUJ5 663 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 GPR107Q5VW38 600 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 YRDCQ86U90 279 aaKnown RBP12.99□□□□□ -0.33
COL4A6-206ENST00000477085 CLVS1Q8IUQ0 354 aaPredicted RBP12.99□□□□□ -0.33
COL4A6-206ENST00000477085 EXD3Q8N9H8 876 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 LSM14AQ8ND56 463 aaKnown RBP12.99□□□□□ -0.33
COL4A6-206ENST00000477085 C5orf34Q96MH7 638 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 AGAP4Q96P64 663 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 VCX3AQ9NNX9 186 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 ZFP64Q9NPA5 681 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 ABI3Q9P2A4 366 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 KLHL21Q9UJP4 597 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 DKKL1Q9UK85 242 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 LSM2Q9Y333 95 aaKnown RBP12.99□□□□□ -0.33
COL4A6-206ENST00000477085 SLC6A5Q9Y345 797 aa12.99□□□□□ -0.33
COL4A6-206ENST00000477085 RNF13O43567 381 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 PLGP00747 810 aaPredicted RBP12.98□□□□□ -0.33
COL4A6-206ENST00000477085 IFNGP01579 166 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 AHCYP23526 432 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 GSTT1P30711 240 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 SRD5A2P31213 254 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 RFC3P40938 356 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 CASRP41180 1078 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 CDC20Q12834 499 aa12.98□□□□□ -0.33
COL4A6-206ENST00000477085 CNPY1Q3B7I2 92 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms