RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 OR8J2Q8NGG1 315 aa10.3□□□□□ -0.76
HDAC6-219ENST00000476625 NEU4Q8WWR8 484 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-219ENST00000476625 TAF15Q92804 592 aaKnown RBP eCLIP10.3□□□□□ -0.765e-10■□□□□ 10.5
HDAC6-219ENST00000476625 TMEM186Q96B77 213 aa10.3□□□□□ -0.76
HDAC6-219ENST00000476625 PTDSS2Q9BVG9 487 aa10.3□□□□□ -0.76
HDAC6-219ENST00000476625 C1QTNF5Q9BXJ0 243 aa10.3□□□□□ -0.76
HDAC6-219ENST00000476625 RSPO3Q9BXY4 272 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-219ENST00000476625 ZNF442Q9H7R0 627 aa10.3□□□□□ -0.76
HDAC6-219ENST00000476625 GPR35Q9HC97 309 aa10.3□□□□□ -0.76
HDAC6-219ENST00000476625 ESM1Q9NQ30 184 aa10.3□□□□□ -0.76
HDAC6-219ENST00000476625 MKS1Q9NXB0 559 aa10.3□□□□□ -0.76
HDAC6-219ENST00000476625 ASIC5Q9NY37 505 aa10.3□□□□□ -0.76
HDAC6-219ENST00000476625 B3GAT1Q9P2W7 334 aa10.3□□□□□ -0.76
HDAC6-219ENST00000476625 PRSS51A0A1B0GVH4 220 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 TMEM89A2RUT3 159 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 FTCDNL1E5RQL4 147 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 ZNF432O94892 652 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 BPGMP07738 259 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 GUSBP08236 651 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 ALDOCP09972 364 aaKnown RBP10.29□□□□□ -0.76
HDAC6-219ENST00000476625 NAT2P11245 290 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 CBR1P16152 277 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 IL7RP16871 459 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 AQP5P55064 265 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 UFM1P61960 85 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 EGR4Q05215 589 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 GTDC1Q4AE62 458 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 AVPI1Q5T686 147 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 SERPINA11Q86U17 422 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 GTF3AQ92664 365 aaKnown RBP10.29□□□□□ -0.76
HDAC6-219ENST00000476625 PMM1Q92871 262 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 GCDHQ92947 438 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-219ENST00000476625 KTI12Q96EK9 354 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-219ENST00000476625 TSPAN32Q96QS1 320 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 TAPBPLQ9BX59 468 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 OBP2BQ9NPH6 170 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 ZNF275Q9NSD4 429 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-219ENST00000476625 SPEF1Q9Y4P9 236 aa10.29□□□□□ -0.76
HDAC6-219ENST00000476625 CDHR4A6H8M9 788 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 CCDC154A6NI56 674 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 B4DSR2 109 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 M0R3G1 203 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 FAAHO00519 579 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 ZNF500O60304 480 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-219ENST00000476625 NPIPB7O75200 414 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 AGR2O95994 175 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 HPRP00739 348 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 MSMBP08118 114 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 PATE4P0C8F1 98 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 GAAP10253 952 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 SAGP10523 405 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-219ENST00000476625 NR2F1P10589 423 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 HLA-DOBP13765 273 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 ETFAP13804 333 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 FKBP2P26885 142 aaKnown RBP10.28□□□□□ -0.76
HDAC6-219ENST00000476625 MAGEB1P43366 347 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 GPR6P46095 362 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-219ENST00000476625 FAHD2BQ6P2I3 314 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-219ENST00000476625 LRRC74BQ6ZQY2 392 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 ABHD12BQ7Z5M8 362 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-219ENST00000476625 COMTD1Q86VU5 262 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 OR52P1PQ8NH57 321 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 MAGEE2Q8TD90 523 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-219ENST00000476625 C22orf15Q8WYQ4 148 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 MRPL24Q96A35 216 aaKnown RBP10.28□□□□□ -0.76
HDAC6-219ENST00000476625 FAHD2AQ96GK7 314 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 ZNF75AQ96N20 296 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 TRNT1Q96Q11 434 aaKnown RBP10.28□□□□□ -0.76
HDAC6-219ENST00000476625 SLC6A7Q99884 636 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 EMC6Q9BV81 110 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 LINC00470Q9BZP3 86 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 RACGAP1Q9H0H5 632 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 ZNF224Q9NZL3 707 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 REV1Q9UBZ9 1251 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 ZNF443Q9Y2A4 671 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-219ENST00000476625 PCDHGB1Q9Y5G3 927 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 ARHGAP32A7KAX9 2087 aa10.28□□□□□ -0.76
HDAC6-219ENST00000476625 A8MVM7 634 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 CDC14BO60729 498 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 BCHEP06276 602 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 DBIP07108 87 aaKnown RBP10.27□□□□□ -0.77
HDAC6-219ENST00000476625 CD79AP11912 226 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 EPHA1P21709 976 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 NR4A1P22736 598 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 COMPP49747 757 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-219ENST00000476625 MVDP53602 400 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 HILS1P60008 231 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 LMO4P61968 165 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 AWAT1Q58HT5 328 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 WBP2NLQ6ICG8 309 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 SHQ1Q6PI26 577 aaKnown RBP10.27□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF621Q6ZSS3 439 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 CMIPQ8IY22 773 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 TMEM123Q8N131 208 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 FGFBP3Q8TAT2 258 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 CCDC115Q96NT0 180 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 ANKRD27Q96NW4 1050 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 OR2M2Q96R28 347 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 NUF2Q9BZD4 464 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 OR51B6Q9H340 312 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms