RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 OR6S1Q8NH40 331 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 TSPEARQ8WU66 669 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 BCL2L2Q92843 193 aaPredicted RBP9.44□□□□□ -0.9
SEC13-214ENST00000476597 SLC38A4Q969I6 547 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 SLC47A1Q96FL8 570 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 THOC1Q96FV9 657 aaKnown RBP9.44□□□□□ -0.9
SEC13-214ENST00000476597 HS6ST2Q96MM7 605 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 OXGR1Q96P68 337 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 WFDC6Q9BQY6 131 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 CPPED1Q9BRF8 314 aaPredicted RBP9.44□□□□□ -0.9
SEC13-214ENST00000476597 LINC00470Q9BZP3 86 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 BARX1Q9HBU1 254 aaPredicted RBP9.44□□□□□ -0.9
SEC13-214ENST00000476597 OBP2BQ9NPH6 170 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 B3GAT1Q9P2W7 334 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 SEC14L4Q9UDX3 406 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.44□□□□□ -0.9
SEC13-214ENST00000476597 LEF1Q9UJU2 399 aaPredicted RBP9.44□□□□□ -0.9
SEC13-214ENST00000476597 POU2F3Q9UKI9 436 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 NDUFAF1Q9Y375 327 aa9.44□□□□□ -0.9
SEC13-214ENST00000476597 TRAV36DV7A0A075B6V5 113 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 A0A087WUJ7 227 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 A0A0B4J2E0 115 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 A0A1B0GX12 115 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 INAFM1C9JVW0 142 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 ZNF587BE7ETH6 402 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 MS4A18H0YCH9 400 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 RPL36A-HNRNPH2H7BZ11 118 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 M0QX08 132 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 AIM2O14862 343 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 EDF1O60869 148 aaKnown RBP9.43□□□□□ -0.9
SEC13-214ENST00000476597 MFN2O95140 757 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 LGI1O95970 557 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 HOXB1P14653 301 aaPredicted RBP9.43□□□□□ -0.9
SEC13-214ENST00000476597 ZNF43P17038 809 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 GRPRP30550 384 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 APOBEC3AP31941 199 aaPredicted RBP9.43□□□□□ -0.9
SEC13-214ENST00000476597 CLDN17P56750 224 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 PCBP3P57721 371 aaKnown RBP9.43□□□□□ -0.9
SEC13-214ENST00000476597 KRTAP1-1Q07627 177 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 DMTNQ08495 405 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 RBBP4Q09028 425 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 NRF1Q16656 503 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 MS4A18Q3C1V0 323 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 ALG10BQ5I7T1 473 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 FAM69AQ5T7M9 428 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 KLHL24Q6TFL4 600 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 DHDDSQ86SQ9 333 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 RETREG3Q86VR2 466 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 PTOV1Q86YD1 416 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 ARMC8Q8IUR7 673 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 ANKK1Q8NFD2 765 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 MAGEE2Q8TD90 523 aaPredicted RBP9.43□□□□□ -0.9
SEC13-214ENST00000476597 SLC41A3Q96GZ6 507 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 ADAD1Q96M93 576 aaKnown RBP9.43□□□□□ -0.9
SEC13-214ENST00000476597 ANKRD27Q96NW4 1050 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 ZNF317Q96PQ6 595 aaPredicted RBP9.43□□□□□ -0.9
SEC13-214ENST00000476597 CGREF1Q99674 301 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 CACNG6Q9BXT2 260 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 EVA1AQ9H8M9 152 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 FKRPQ9H9S5 495 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 TMEM27Q9HBJ8 222 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 TESQ9UGI8 421 aaKnown RBP9.43□□□□□ -0.9
SEC13-214ENST00000476597 TRIM33Q9UPN9 1127 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 RCE1Q9Y256 329 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 ATP23Q9Y6H3 246 aa9.43□□□□□ -0.9
SEC13-214ENST00000476597 COL6A5A8TX70 2615 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 SONP18583 2426 aaKnown RBP9.42□□□□□ -0.9
SEC13-214ENST00000476597 ALPK2Q86TB3 2170 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 ARPC4-TTLL3A0A0A6YYG9 625 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 M0R082 166 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 SSX4O60224 188 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 SLC43A1O75387 559 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 C8BP07358 591 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 GTF2E2P29084 291 aaKnown RBP9.42□□□□□ -0.9
SEC13-214ENST00000476597 PCSK6P29122 969 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 AQP1P29972 269 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 RGS8P57771 180 aaPredicted RBP9.42□□□□□ -0.9
SEC13-214ENST00000476597 C1DQ13901 141 aaKnown RBP9.42□□□□□ -0.9
SEC13-214ENST00000476597 SELPLGQ14242 412 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 MFSD13AQ14CX5 517 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 RAB35Q15286 201 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 DUSP7Q16829 419 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 METTL21CQ5VZV1 264 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 ANKRD16Q6P6B7 361 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 NHLRC1Q6VVB1 395 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 C11orf65Q8NCR3 313 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 MAPK1IP1LQ8NDC0 245 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 ADPRHL1Q8NDY3 354 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 OR10H5Q8NGA6 315 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 ZNF417Q8TAU3 575 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 SLC38A2Q96QD8 506 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 ZNF587Q96SQ5 575 aaPredicted RBP9.42□□□□□ -0.9
SEC13-214ENST00000476597 SIKE1Q9BRV8 207 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 NELFAQ9H3P2 528 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 KAT8Q9H7Z6 458 aaKnown RBP9.42□□□□□ -0.9
SEC13-214ENST00000476597 NPHS2Q9NP85 383 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 ARGLU1Q9NWB6 273 aaPredicted RBP9.42□□□□□ -0.9
SEC13-214ENST00000476597 KLHL14Q9P2G3 628 aa9.42□□□□□ -0.9
SEC13-214ENST00000476597 CRNNQ9UBG3 495 aaPredicted RBP9.42□□□□□ -0.9
SEC13-214ENST00000476597 SLC13A4Q9UKG4 626 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms