RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ZNF740Q8NDX6 193 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 OR4F6Q8NGB9 312 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 NEIL3Q8TAT5 605 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 TM4SF19Q96DZ7 209 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 CCDC77Q9BR77 488 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 ACTR6Q9GZN1 396 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 GIN1Q9NXP7 522 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 CSDC2Q9Y534 153 aaKnown RBP4.13□□□□□ -1.75
VPS50-212ENST00000476413 ABCD4O14678 606 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 HAT1O14929 419 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 TOM1O60784 492 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 HMMRO75330 724 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 P04436 131 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 FUT3P21217 361 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 CASP14P31944 242 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 PRMT2P55345 433 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 DLX1P56177 255 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 GNMTQ14749 295 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 GPNMBQ14956 572 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 SSX2Q16385 188 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 MARCH8Q5T0T0 291 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 OTPQ5XKR4 325 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 TMIGD1Q6UXZ0 262 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 LRRC31Q6UY01 552 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 UTS2BQ765I0 119 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 NANOGNBQ7Z5D8 188 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 ERI1Q8IV48 349 aaKnown RBP4.12□□□□□ -1.75
VPS50-212ENST00000476413 ACOT4Q8N9L9 421 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 RAB3IL1Q8TBN0 382 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 DCUN1D4Q92564 292 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 FGF14Q92915 247 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 RASD2Q96D21 266 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 NAT9Q9BTE0 207 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 NARFLQ9H6Q4 476 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 SPATA7Q9P0W8 599 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 CDH10Q9Y6N8 788 aa4.12□□□□□ -1.75
VPS50-212ENST00000476413 EMC8O43402 210 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 UBTFL1P0CB47 393 aaPredicted RBP4.11□□□□□ -1.75
VPS50-212ENST00000476413 FDFT1P37268 417 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 SSR1P43307 286 aaKnown RBP4.11□□□□□ -1.75
VPS50-212ENST00000476413 YAP1P46937 504 aaKnown RBP4.11□□□□□ -1.75
VPS50-212ENST00000476413 IRX3P78415 501 aaPredicted RBP4.11□□□□□ -1.75
VPS50-212ENST00000476413 Q6ZN92 141 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 ZNF571Q7Z3V5 609 aaPredicted RBP4.11□□□□□ -1.75
VPS50-212ENST00000476413 ZNF546Q86UE3 836 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 C11orf53Q8IXP5 236 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 KCNG3Q8TAE7 436 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 TMEM101Q96IK0 257 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 MS4A4EQ96PG1 132 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 POLR2J2Q9GZM3 115 aaKnown RBP4.11□□□□□ -1.75
VPS50-212ENST00000476413 POLR2J3Q9H1A7 115 aaKnown RBP4.11□□□□□ -1.75
VPS50-212ENST00000476413 QPCTLQ9NXS2 382 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 KLHL28Q9NXS3 571 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 MMP17Q9ULZ9 603 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 TRAF3IP3Q9Y228 551 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 ASF1AQ9Y294 204 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 NSD2O96028 1365 aa4.11□□□□□ -1.75
VPS50-212ENST00000476413 RBMY1BA6NDE4 496 aaKnown RBP4.1□□□□□ -1.75
VPS50-212ENST00000476413 RBMY1EA6NEQ0 496 aaKnown RBP4.1□□□□□ -1.75
VPS50-212ENST00000476413 AGPAT2O15120 278 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 NPIPB7O75200 414 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 RBMY1DP0C7P1 496 aaKnown RBP4.1□□□□□ -1.75
VPS50-212ENST00000476413 RBMY1A1P0DJD3 496 aaKnown RBP4.1□□□□□ -1.75
VPS50-212ENST00000476413 TBPP20226 339 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 COX7A1P24310 79 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 BTCP35070 178 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 VDAC2P45880 294 aaPredicted RBP4.1□□□□□ -1.75
VPS50-212ENST00000476413 CAV2P51636 162 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 TLE4Q04727 773 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 ZNF630Q2M218 657 aaPredicted RBP4.1□□□□□ -1.75
VPS50-212ENST00000476413 CTRB2Q6GPI1 263 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 RNASEKQ6P5S7 137 aaKnown RBP4.1□□□□□ -1.75
VPS50-212ENST00000476413 C20orf203Q8NBC4 194 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 OR9G1Q8NH87 305 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 PYROXD1Q8WU10 500 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 MBOAT4Q96T53 435 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 CLCF1Q9UBD9 225 aa4.1□□□□□ -1.75
VPS50-212ENST00000476413 USP27XA6NNY8 438 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 ERLIN1O75477 346 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 FGF1P05230 155 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 CD1EP15812 388 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 GABRR1P24046 479 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 CD1BP29016 333 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 GLP1RP43220 463 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 ARRB1P49407 418 aaPredicted RBP4.09□□□□□ -1.75
VPS50-212ENST00000476413 LYZP61626 148 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 CCNA1P78396 465 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 DAZ2Q13117 558 aaKnown RBP4.09□□□□□ -1.75
VPS50-212ENST00000476413 ATP6AP1Q15904 470 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 ZNF620Q6ZNG0 422 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 RALGPS2Q86X27 583 aaPredicted RBP4.09□□□□□ -1.75
VPS50-212ENST00000476413 OR6C4Q8NGE1 309 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 ARPC1AQ92747 370 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 PHYHIPLQ96FC7 376 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 IMMP1LQ96LU5 166 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 TMEM246Q9BRR3 403 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 RIOK1Q9BRS2 568 aaKnown RBP4.09□□□□□ -1.75
VPS50-212ENST00000476413 DEFB127Q9H1M4 99 aa4.09□□□□□ -1.75
VPS50-212ENST00000476413 SLC25A22Q9H936 323 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms