RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ZFPM2Q8WW38 1151 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 THAP4Q8WY91 577 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 CDS1Q92903 461 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 SLC25A38Q96DW6 304 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 PELI1Q96FA3 418 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 SERINC2Q96SA4 455 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 ORAI3Q9BRQ5 295 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 YIPF4Q9BSR8 244 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 CACNG6Q9BXT2 260 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 ADAM19Q9H013 955 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 MED28Q9H204 178 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 CLEC4MQ9H2X3 399 aaPredicted RBP6.28□□□□□ -1.4
UBR4-212ENST00000475973 MCCC2Q9HCC0 563 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 MRPS30Q9NP92 439 aaKnown RBP6.28□□□□□ -1.4
UBR4-212ENST00000475973 CTPS2Q9NRF8 586 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 UCKL1Q9NWZ5 548 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 SPHK1Q9NYA1 384 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 FLRT3Q9NZU0 649 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 FRRS1LQ9P0K9 344 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 KIF25Q9UIL4 384 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 SLC7A7Q9UM01 511 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 DAPP1Q9UN19 280 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 CA5BQ9Y2D0 317 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 WDR45Q9Y484 360 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 PCDHGA1Q9Y5H4 931 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 HEBP2Q9Y5Z4 205 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 SLCO1B1Q9Y6L6 691 aa6.28□□□□□ -1.4
UBR4-212ENST00000475973 PCDH15Q96QU1 1955 aa6.27□□□□□ -1.4
UBR4-212ENST00000475973 A0A0G2JN53 185 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 TRBV5-5A0A0J9YX44 114 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 A0A1W2PR77 199 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 DAPL1A0PJW8 107 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 ANKRD20A5PA0PJZ0 165 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 GLOD5A6NK44 160 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 FAM183AA6NL82 134 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 SNRPGP15A8MWD9 76 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 PRR23D1E9PI22 279 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 SMLR1H3BR10 107 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 GABARAPH6UMI1 98 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 CYR61O00622 381 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 LCE2BO14633 110 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 EEF1E1O43324 174 aaKnown RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 PEX14O75381 377 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 STX11O75558 287 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 ERAL1O75616 437 aaKnown RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 ARL6IP5O75915 188 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 LDOC1O95751 146 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 TXNDC12O95881 172 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 CH25HO95992 272 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 HPXP02790 462 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 WNT1P04628 370 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 H2AFB2P0C5Z0 115 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 PRR23D2P0DMB1 279 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 APEHP13798 732 aaKnown RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 CPMP14384 443 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 IFNGR1P15260 489 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 HNRNPA2B1P22626 353 aaKnown RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 NOS3P29474 1203 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 CMPK1P30085 196 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 TALDO1P37837 337 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 PTH2RP49190 550 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 DIO1P49895 249 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 PRKAG1P54619 331 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 OR12D2P58182 307 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 SNRPD2P62316 118 aaKnown RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 DGCR2P98153 550 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 MRPL28Q13084 256 aaKnown RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 TSTA3Q13630 321 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 IRF4Q15306 451 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 ZNF141Q15928 474 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 PRICKLE4Q2TBC4 344 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 MRPL2Q5T653 305 aaKnown RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 IDNKQ5T6J7 187 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 FAM27D1Q5T7N8 215 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 BCL2L15Q5TBC7 163 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 LINC01590Q5TEZ4 76 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 B3GNTL1Q67FW5 361 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 ZNF57Q68EA5 555 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 LYPD4Q6UWN0 246 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 B3GLCTQ6Y288 498 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 RTL4Q6ZR62 310 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 MED25Q71SY5 747 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 RRM2BQ7LG56 351 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 SSX6Q7RTT6 188 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 TMPRSS7Q7RTY8 843 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 CEACAM19Q7Z692 300 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 RANBP3LQ86VV4 465 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 OR6V1Q8N148 313 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 UBE2J2Q8N2K1 259 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 LRRC17Q8N6Y2 441 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 SAMD12Q8N8I0 201 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 CDRT4Q8N9R6 151 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 LRRC75AQ8NAA5 344 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 OR4K14Q8NGD5 310 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 OR4D9Q8NGE8 314 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 PFN4Q8NHR9 129 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 SUN5Q8TC36 379 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 FANK1Q8TC84 345 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 ZNF431Q8TF32 576 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 SMPDL3BQ92485 455 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms