RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 EGFP01133 1207 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CT45A6P0DMU7 189 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CT45A5P0DMU8 189 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CT45A7P0DMV0 189 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CT45A8P0DMV1 189 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CT45A9P0DMV2 189 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 FCER1GP30273 86 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CRYBA2P53672 197 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CATR1Q13166 79 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CT45A2Q5DJT8 189 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CT45A1Q5HYN5 189 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 NHLRC3Q5JS37 347 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 NAA40Q86UY6 237 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 CT45A3Q8NHU0 189 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 ADAMTS18Q8TE60 1221 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 FOXJ1Q92949 421 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 HGDQ93099 445 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 DPH2Q9BQC3 489 aaPredicted RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 PRR14Q9BWN1 585 aa10.73□□□□□ -0.69
U2AF1-209ENST00000475639 QRSL1Q9H0R6 528 aaKnown RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 COL11A1P12107 1806 aaPredicted RBP10.73□□□□□ -0.69
U2AF1-209ENST00000475639 NPIPA5A0A0B4J1W7 369 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 DNASE2O00115 360 aaPredicted RBP10.72□□□□□ -0.69
U2AF1-209ENST00000475639 SOCS5O75159 536 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 FBLP22087 321 aaKnown RBP10.72□□□□□ -0.69
U2AF1-209ENST00000475639 EFNA3P52797 238 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 MRPS34P82930 218 aaKnown RBP10.72□□□□□ -0.69
U2AF1-209ENST00000475639 ZNF91Q05481 1191 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 FIGNL1Q6PIW4 674 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 HORMAD2Q8N7B1 307 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 IL1F10Q8WWZ1 152 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 SCMH1Q96GD3 660 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 DPH7Q9BTV6 452 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 NXF5Q9H1B4 397 aaKnown RBP10.72□□□□□ -0.69
U2AF1-209ENST00000475639 MVB12BQ9H7P6 319 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 MTHFD2LQ9H903 347 aaPredicted RBP10.72□□□□□ -0.69
U2AF1-209ENST00000475639 TCRBV16S1A1N1A0A5B0 115 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 C7orf66A4D0T2 115 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 ANKRD30BLA7E2S9 258 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 MEIS3P2A8K0S8 358 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 IMPA2O14732 288 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 SLC16A5O15375 505 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 KCNK5O95279 499 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 IGFBP1P08833 259 aaPredicted RBP10.72□□□□□ -0.69
U2AF1-209ENST00000475639 HLA-EP13747 358 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 CNR2P34972 360 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 PRPS1P60891 318 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 ARHGAP1Q07960 439 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 PAQR6Q6TCH4 344 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 ZNF836Q6ZNA1 936 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 COX15Q7KZN9 410 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 C15orf54Q8N8G6 183 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 OR4N2Q8NGD1 307 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 NPRL2Q8WTW4 380 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 RAB7BQ96AH8 199 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 FAM122AQ96E09 287 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 WDR92Q96MX6 357 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 GINS3Q9BRX5 216 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 ESRP2Q9H6T0 727 aaKnown RBP10.72□□□□□ -0.69
U2AF1-209ENST00000475639 ACKR4Q9NPB9 350 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 PLEK2Q9NYT0 353 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 ALPK3Q96L96 1907 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 NUDT21O43809 227 aaKnown RBP10.72□□□□□ -0.69
U2AF1-209ENST00000475639 ADAMTS4O75173 837 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 DBHP09172 617 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 HAPLN1P10915 354 aaPredicted RBP10.72□□□□□ -0.69
U2AF1-209ENST00000475639 KCNJ10P78508 379 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 GPR176Q14439 515 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 HMGN3Q15651 99 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 PLA1AQ53H76 456 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 ABHD17BQ5VST6 288 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 MAMSTRQ6ZN01 415 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 SERPINA11Q86U17 422 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 METTL27Q8N6F8 245 aaPredicted RBP10.72□□□□□ -0.69
U2AF1-209ENST00000475639 CSNK1A1LQ8N752 337 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 MS4A3Q96HJ5 214 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 HHLA2Q9UM44 414 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 F5H5K5 113 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 DUX1O43812 170 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 OSMP13725 252 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 ETFAP13804 333 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 MAKP20794 623 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 GLO1Q04760 184 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 IRF4Q15306 451 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 RNF151Q2KHN1 245 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 TMEM31Q5JXX7 168 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 PRAMEF8Q5VWM4 474 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 PRAMEF7Q5VXH5 474 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 PTOV1Q86YD1 416 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 FAM173AQ9BQD7 235 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 IL26Q9NPH9 171 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 NCDNQ9UBB6 729 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 GJD2Q9UKL4 321 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 AK6Q9Y3D8 172 aaKnown RBP10.72□□□□□ -0.69
U2AF1-209ENST00000475639 INSL6Q9Y581 213 aa10.72□□□□□ -0.69
U2AF1-209ENST00000475639 LCTP09848 1927 aa10.71□□□□□ -0.69
U2AF1-209ENST00000475639 SPTA1P02549 2419 aa10.71□□□□□ -0.69
U2AF1-209ENST00000475639 C2orf78A6NCI8 922 aa10.71□□□□□ -0.69
U2AF1-209ENST00000475639 CBX7O95931 251 aa10.71□□□□□ -0.69
U2AF1-209ENST00000475639 HOXB5P09067 269 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms