RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 BTLAQ7Z6A9 289 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 SPATA24Q86W54 205 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 EPHX4Q8IUS5 362 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 TUSC5Q8IXB3 177 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 NRMQ8IXM6 262 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 KDM8Q8N371 416 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 RELL2Q8NC24 303 aaPredicted RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 OR6S1Q8NH40 331 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 OR52J3Q8NH60 311 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF417Q8TAU3 575 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 TMEM239Q8WW34 195 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 ACOT11Q8WXI4 607 aaPredicted RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 NRGNQ92686 78 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 RND1Q92730 232 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 CPNE4Q96A23 557 aaPredicted RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF775Q96BV0 537 aaPredicted RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 SLC25A36Q96CQ1 311 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 DDIT4LQ96D03 193 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 STARD4Q96DR4 205 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 DUS3LQ96G46 650 aaKnown RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF587Q96SQ5 575 aaPredicted RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 PSD2Q9BQI7 771 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 FNDC11Q9BVV2 318 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 SLC19A3Q9BZV2 496 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 UCK2Q9BZX2 261 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 DENND2DQ9H6A0 471 aaPredicted RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 NTN4Q9HB63 628 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 KLHL13Q9P2N7 655 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 STOML1Q9UBI4 398 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 TESMINQ9Y4I5 508 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 LYVE1Q9Y5Y7 322 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 SPIN1Q9Y657 262 aaPredicted RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 SH3PXD2BA1X283 911 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 H3BNX3 289 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 PLPP3O14495 311 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 CDC42EP2O14613 210 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 SS18L1O75177 396 aaPredicted RBP6.2□□□□□ -1.42
LIMD1-204ENST00000474665 FKBP6O75344 327 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 AHSA1O95433 338 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 IGF2P01344 180 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 GPIP06744 558 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 UMPSP11172 480 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 HLA-DOBP13765 273 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 NQO1P15559 274 aaKnown RBP6.2□□□□□ -1.42
LIMD1-204ENST00000474665 CTSSP25774 331 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 AGTR1P30556 359 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 RRM2P31350 389 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 OMPP47874 163 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 CTBP2P56545 445 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 FXYD6P3P58550 94 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 CSNK2A1P68400 391 aaPredicted RBP6.2□□□□□ -1.42
LIMD1-204ENST00000474665 PRKCDQ05655 676 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 CHRNB3Q05901 458 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 LAPTM4AQ15012 233 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 TRAM2Q15035 370 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 PDK3Q15120 406 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 EXOC3L2Q2M3D2 409 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 FAM98BQ52LJ0 330 aaKnown RBP6.2□□□□□ -1.42
LIMD1-204ENST00000474665 PDSS1Q5T2R2 415 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 ANKRD34AQ69YU3 496 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 TMEM211Q6ICI0 200 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 OR2T5Q6IEZ7 315 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 MBOAT2Q6ZWT7 520 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 H1FNTQ75WM6 255 aaPredicted RBP6.2□□□□□ -1.42
LIMD1-204ENST00000474665 ZER1Q7Z7L7 766 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 HS3ST5Q8IZT8 346 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 OR4K5Q8NGD3 323 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 OR2T29Q8NH02 315 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 LILRB4Q8NHJ6 448 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 RNF217Q8TC41 542 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 LIPHQ8WWY8 451 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 SDCCAG3Q96C92 435 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 LRGUKQ96M69 825 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 HS6ST2Q96MM7 605 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF385AQ96PM9 386 aaKnown RBP6.2□□□□□ -1.42
LIMD1-204ENST00000474665 TM9SF2Q99805 663 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 ENKD1Q9H0I2 346 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 CXXC4Q9H2H0 198 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 ANKRD19PQ9H560 264 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 BCO1Q9HAY6 547 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 TIGARQ9NQ88 270 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 PAQR5Q9NXK6 330 aaPredicted RBP6.2□□□□□ -1.42
LIMD1-204ENST00000474665 MRPL39Q9NYK5 338 aaKnown RBP6.2□□□□□ -1.42
LIMD1-204ENST00000474665 TAS2R5Q9NYW4 299 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 SELENONQ9NZV5 590 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 JKAMPQ9P055 326 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 MCTS1Q9ULC4 181 aaKnown RBP6.2□□□□□ -1.42
LIMD1-204ENST00000474665 AURKCQ9UQB9 309 aa6.2□□□□□ -1.42
LIMD1-204ENST00000474665 MAGED1Q9Y5V3 778 aaPredicted RBP6.2□□□□□ -1.42
LIMD1-204ENST00000474665 LOC102725191A0A1B0GVB3 256 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 NKX2-6A6NCS4 301 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 HSPB2A8KAH6 182 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF724A8MTY0 619 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 TRAF3IP2O43734 574 aaPredicted RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 OR2T1O43869 369 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 EIF1BO60739 113 aaKnown RBP6.19□□□□□ -1.42
LIMD1-204ENST00000474665 ENTPD5O75356 428 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 PTP4A3O75365 173 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 TIPRLO75663 272 aa6.19□□□□□ -1.42
LIMD1-204ENST00000474665 OR7A10O76100 309 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms