RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 LINC00470Q9BZP3 86 aa16.21■□□□□ 0.19
COL7A1-209ENST00000474432 ALG2Q9H553 416 aa16.21■□□□□ 0.19
COL7A1-209ENST00000474432 FAIMQ9NVQ4 179 aa16.21■□□□□ 0.19
COL7A1-209ENST00000474432 KLHL14Q9P2G3 628 aa16.21■□□□□ 0.19
COL7A1-209ENST00000474432 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-209ENST00000474432 A0A087WUJ7 227 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 A0A096LNT2 108 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 A0A0B4J2E0 115 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 IGHV1-18A0A0C4DH31 117 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 LOC102725191A0A1B0GVB3 256 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 A0A1B0GX12 115 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 ATP6V1G2-DDX39BF2Z307 99 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 M0R082 166 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 SLC6A2P23975 617 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 GRPRP30550 384 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 CLDN17P56750 224 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 MST1LQ2TV78 715 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 ALG10BQ5I7T1 473 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 FAM69AQ5T7M9 428 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 FAM91A1Q658Y4 838 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 ZNF544Q6NX49 715 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 ULK3Q6PHR2 472 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 KRT73Q86Y46 540 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 WDFY1Q8IWB7 410 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 HIPK4Q8NE63 616 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 GPR32P1Q8NGA4 272 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 ZNF417Q8TAU3 575 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 DNAJA4Q8WW22 397 aaPredicted RBP16.2■□□□□ 0.18
COL7A1-209ENST00000474432 ZNF837Q96EG3 531 aaPredicted RBP16.2■□□□□ 0.18
COL7A1-209ENST00000474432 SLC41A3Q96GZ6 507 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 OXGR1Q96P68 337 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 ZNF587Q96SQ5 575 aaPredicted RBP16.2■□□□□ 0.18
COL7A1-209ENST00000474432 SPATA5L1Q9BVQ7 753 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 RPS6KB2Q9UBS0 482 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 TESQ9UGI8 421 aaKnown RBP16.2■□□□□ 0.18
COL7A1-209ENST00000474432 LEF1Q9UJU2 399 aaPredicted RBP16.2■□□□□ 0.18
COL7A1-209ENST00000474432 POU2F3Q9UKI9 436 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 CORO2BQ9UQ03 480 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 RCE1Q9Y256 329 aa16.2■□□□□ 0.18
COL7A1-209ENST00000474432 TRAV36DV7A0A075B6V5 113 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 EVPLLA8MZ36 301 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 ZNF587BE7ETH6 402 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 MS4A18H0YCH9 400 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 RPL36A-HNRNPH2H7BZ11 118 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 TRAF3IP2O43734 574 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-209ENST00000474432 OR2T1O43869 369 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 HPRP00739 348 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 BGLAPP02818 100 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 FABP6P51161 128 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 MTPNP58546 118 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 OR1Q1Q15612 314 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 NPTX1Q15818 432 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 DUSP7Q16829 419 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 MS4A18Q3C1V0 323 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 C5orf46Q6UWT4 87 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 ABHD12BQ7Z5M8 362 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-209ENST00000474432 NET1Q7Z628 596 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-209ENST00000474432 DHDDSQ86SQ9 333 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 TMEM123Q8N131 208 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 MAGEE2Q8TD90 523 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-209ENST00000474432 HTRA1Q92743 480 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 CGREF1Q99674 301 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 RABEP2Q9H5N1 569 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 NPHS2Q9NP85 383 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 OBP2BQ9NPH6 170 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 CRNNQ9UBG3 495 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-209ENST00000474432 MOKQ9UQ07 419 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 NDUFAF1Q9Y375 327 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 ATP23Q9Y6H3 246 aa16.19■□□□□ 0.18
COL7A1-209ENST00000474432 ARPC4-TTLL3A0A0A6YYG9 625 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 PRORSD1PA6NEY8 169 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 OR6C65A6NJZ3 312 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 SSX4O60224 188 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 LYPD3O95274 346 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 WNT11O96014 354 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 HLA-DOBP13765 273 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 ZNF43P17038 809 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 CBLP22681 906 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 GZMMP51124 257 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 CDH12P55289 794 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 RGS8P57771 180 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-209ENST00000474432 TUBA1BP68363 451 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 TUBA4AP68366 448 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 ROR2Q01974 943 aaKnown RBP16.18■□□□□ 0.18
COL7A1-209ENST00000474432 NRF1Q16656 503 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 PHYHD1Q5SRE7 291 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 LINC00114Q6XXX2 140 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 TUBA1AQ71U36 451 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 H1FNTQ75WM6 255 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-209ENST00000474432 TSPYL5Q86VY4 417 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-209ENST00000474432 ARMC8Q8IUR7 673 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 FBXL14Q8N1E6 418 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 SMYD1Q8NB12 490 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 ADPRHL1Q8NDY3 354 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 OR10H5Q8NGA6 315 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 OR4D11Q8NGI4 311 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 OR6S1Q8NH40 331 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 SLC47A1Q96FL8 570 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 HS6ST2Q96MM7 605 aa16.18■□□□□ 0.18
COL7A1-209ENST00000474432 MOGAT1Q96PD6 335 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms