RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TAF7Q15545 349 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 BCL7AQ4VC05 210 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 CFAP157Q5JU67 520 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 FRMPD2BQ6IN97 320 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 FAM71E1Q6IPT2 247 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 ZNF620Q6ZNG0 422 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 RALGPS2Q86X27 583 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 SLC38A6Q8IZM9 456 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 CATSPER1Q8NEC5 780 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 DTX3LQ8TDB6 740 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 UFD1Q92890 307 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 TBC1D31Q96DN5 1066 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 TSNARE1Q96NA8 513 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 RBM14Q96PK6 669 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 RNF2Q99496 336 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 MRPL45Q9BRJ2 306 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 RAB33BQ9H082 229 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 IFI27L2Q9H2X8 130 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 SRMSQ9H3Y6 488 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 DMAP1Q9NPF5 467 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 CCL28Q9NRJ3 127 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 EXD2Q9NVH0 621 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 SLC25A37Q9NYZ2 338 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 SEC14L3Q9UDX4 400 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 TBX21Q9UL17 535 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 POLDIP2Q9Y2S7 368 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 PRG3Q9Y2Y8 225 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 TIMM10BQ9Y5J6 103 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 CARMIL3Q8ND23 1372 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 IGLV11-55A0A075B6I3 123 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 A0A096LNJ9 63 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 DLGAP1O14490 977 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 XKRYO14609 159 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 MBTPS2O43462 519 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 GMFGO60234 142 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 ZNF324O75467 553 aaPredicted RBP2□□□□□ -2.09
ECHDC1-213ENST00000474240 ATP5LO75964 103 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 DIRAS1O95057 198 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 CLDN9O95484 217 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 ZDHHC11BP0C7U3 371 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 RPS14P62263 151 aaKnown RBP2□□□□□ -2.09
ECHDC1-213ENST00000474240 ACTA1P68133 377 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 SMARCB1Q12824 385 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 KIAA0087Q14695 138 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 GNMTQ14749 295 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 LRRC23Q53EV4 343 aaPredicted RBP2□□□□□ -2.09
ECHDC1-213ENST00000474240 SFT2D3Q587I9 215 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 CARD16Q5EG05 197 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 ZNF691Q5VV52 312 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 LRRC31Q6UY01 552 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 ZNF546Q86UE3 836 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 NUDCD3Q8IVD9 361 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 TMEM61Q8N0U2 210 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 FAM83FQ8NEG4 500 aaPredicted RBP2□□□□□ -2.09
ECHDC1-213ENST00000474240 VN1R2Q8NFZ6 395 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 OR2G3Q8NGZ4 309 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 FGF11Q92914 225 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 COQ2Q96H96 371 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 RPRD1AQ96P16 312 aaPredicted RBP2□□□□□ -2.09
ECHDC1-213ENST00000474240 KCTD14Q9BQ13 255 aaPredicted RBP2□□□□□ -2.09
ECHDC1-213ENST00000474240 ACTR6Q9GZN1 396 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 PALMDQ9NP74 551 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 SMOXQ9NWM0 555 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 THUMPD1Q9NXG2 353 aaKnown RBP2□□□□□ -2.09
ECHDC1-213ENST00000474240 GIN1Q9NXP7 522 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 OR12D3Q9UGF7 316 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 GTF3C1Q12789 2109 aa2□□□□□ -2.09
ECHDC1-213ENST00000474240 NSG1A0A0A6YYJ2 146 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 IGKV6-21A0A0C4DH24 114 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 TCRBV9S1A1TA0A576 114 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 C12orf77C9JDV5 145 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 AIREO43918 545 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 RAMP3O60896 148 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 OXSR1O95747 527 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 GUCA1CO95843 209 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 MOSP00540 346 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 IQCF3P0C7M6 154 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 HNF1AP20823 631 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 CCR1P32246 355 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 RDXP35241 583 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 HSD17B2P37059 387 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 EPS15P42566 896 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 QARSP47897 775 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 CASP4P49662 377 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 SPIBQ01892 262 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 ENPEPQ07075 957 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 EIF4EBP1Q13541 118 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 OR5I1Q13606 314 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 SHHQ15465 462 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 KCTD21Q4G0X4 260 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 FILIP1LQ4L180 1135 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 OR2G6Q5TZ20 316 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 SLC25A24Q6NUK1 477 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 CES3Q6UWW8 571 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 ZNF621Q6ZSS3 439 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 MFSD6LQ8IWD5 586 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 GMCL1P1Q8NEA9 526 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 STEAP2Q8NFT2 490 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 OR4F15Q8NGB8 312 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms