RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 KRT34O76011 436 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 WNT11O96014 354 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 IFNA14P01570 189 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 CD247P20963 164 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 CBLP22681 906 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 PTAFRP25105 342 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 SELENOPP49908 381 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 P2RY4P51582 365 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 CLDN17P56750 224 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 DUSP7Q16829 419 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 ZNF672Q499Z4 452 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-226ENST00000473066 C1QTNF12Q5T7M4 302 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 HMBOX1Q6NT76 420 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 SEZ6L2Q6UXD5 910 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 ARPINQ7Z6K5 226 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 PIAS4Q8N2W9 510 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-226ENST00000473066 ZIC4Q8N9L1 334 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 ADPRHL1Q8NDY3 354 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 GPR32P1Q8NGA4 272 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 OR6S1Q8NH40 331 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 C10orf82Q8WW14 230 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 TAAR8Q969N4 342 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 GTPBP3Q969Y2 492 aaKnown RBP13.71□□□□□ -0.21
MRPL55-226ENST00000473066 TAMM41Q96BW9 452 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 RADILQ96JH8 1075 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 ALKBH3Q96Q83 286 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-226ENST00000473066 TMEM43Q9BTV4 400 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 AMBRA1Q9C0C7 1298 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 SLC17A5Q9NRA2 495 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 NPAP1Q9NZP6 1156 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 BAG5Q9UL15 447 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 LAMP3Q9UQV4 416 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 SLC25A15Q9Y619 301 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 PLCE1Q9P212 2302 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 IGKV1D-42A0A075B6H8 117 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 PDLIM1O00151 329 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 CCDC22O60826 627 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 PTNP21246 168 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 PTH2RP49190 550 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 CDH12P55289 794 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 FOXG1P55316 489 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-226ENST00000473066 RIPPLY3P57055 190 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 PRPS1P60891 318 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 ENTPD8Q5MY95 495 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 SLC22A25Q6T423 547 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 H1FNTQ75WM6 255 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-226ENST00000473066 YTHDF3Q7Z739 585 aaKnown RBP13.7□□□□□ -0.22
MRPL55-226ENST00000473066 EPHX4Q8IUS5 362 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 UEVLDQ8IX04 471 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 KDM8Q8N371 416 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 GPR137CQ8N3F9 429 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 SCAIQ8N9R8 606 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 OR6T1Q8NGN1 323 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 MUS81Q96NY9 551 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 RSPO3Q9BXY4 272 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-226ENST00000473066 GSX2Q9BZM3 304 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 NSRP1Q9H0G5 558 aaKnown RBP13.7□□□□□ -0.22
MRPL55-226ENST00000473066 ARMCX1Q9P291 453 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 AP3M1Q9Y2T2 418 aa13.7□□□□□ -0.22
MRPL55-226ENST00000473066 TRAPPC13A5PLN9 417 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 FAM220BPB1ANY3 271 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 FZD7O75084 574 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 FOSL1P15407 271 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 SH3BGRP55822 239 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-226ENST00000473066 UBE2NP61088 152 aaKnown RBP13.69□□□□□ -0.22
MRPL55-226ENST00000473066 PMS2P3Q13401 168 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 VEZF1Q14119 521 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 LRRC23Q53EV4 343 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-226ENST00000473066 TTC33Q6PID6 262 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-226ENST00000473066 PRSS57Q6UWY2 283 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 CCDC80Q76M96 950 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 POU5F2Q8N7G0 328 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 PIK3C3Q8NEB9 887 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 OR2T12Q8NG77 320 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 RP9Q8TA86 221 aaKnown RBP13.69□□□□□ -0.22
MRPL55-226ENST00000473066 ADAMTS16Q8TE57 1224 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 SMAP2Q8WU79 429 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-226ENST00000473066 NEUROG1Q92886 237 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 RCN3Q96D15 328 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 TRMT61AQ96FX7 289 aaKnown RBP13.69□□□□□ -0.22
MRPL55-226ENST00000473066 KCNS3Q9BQ31 491 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 LINC00470Q9BZP3 86 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 OBP2BQ9NPH6 170 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 CISD1Q9NZ45 108 aaKnown RBP13.69□□□□□ -0.22
MRPL55-226ENST00000473066 SEC14L4Q9UDX3 406 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 C2CD3Q4AC94 2353 aa13.69□□□□□ -0.22
MRPL55-226ENST00000473066 FLNAP21333 2647 aaKnown RBP13.68□□□□□ -0.22
MRPL55-226ENST00000473066 TPST2O60704 377 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 OR6A2O95222 327 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 MT-ATP6P00846 226 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 BGLAPP02818 100 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 CD40P25942 277 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 GZMMP51124 257 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 ATP5J2P56134 94 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 ROR2Q01974 943 aaKnown RBP13.68□□□□□ -0.22
MRPL55-226ENST00000473066 POU3F1Q03052 451 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-226ENST00000473066 CARM1Q86X55 608 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 CALHM3Q86XJ0 350 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 OR1K1Q8NGR3 316 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 MPP4Q96JB8 637 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms