RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RPS6KB2Q9UBS0 482 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 MOKQ9UQ07 419 aa13.35□□□□□ -0.27
VTI1A-203ENST00000472892 ALPK2Q86TB3 2170 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 A0A096LNT2 108 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 ARPC4-TTLL3A0A0A6YYG9 625 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 LOC102725191A0A1B0GVB3 256 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 A0A1B0GWA3 101 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 ATP6V1G2-DDX39BF2Z307 99 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 NR5A2O00482 541 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 OR2T1O43869 369 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 TPST1O60507 370 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 TP53P04637 393 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-203ENST00000472892 BMP4P12644 408 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 HTR2AP28223 471 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 ATP4BP51164 291 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 CHRNB3Q05901 458 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 SWI5Q1ZZU3 235 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 MST1LQ2TV78 715 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 C5orf46Q6UWT4 87 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 NET1Q7Z628 596 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-203ENST00000472892 ANKK1Q8NFD2 765 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 DNAJA4Q8WW22 397 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-203ENST00000472892 TAAR8Q969N4 342 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 OXGR1Q96P68 337 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 MDFIQ99750 246 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 SPATA5L1Q9BVQ7 753 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 IKZF5Q9H5V7 419 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 TMEM38AQ9H6F2 299 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 B3GAT1Q9P2W7 334 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 CRNNQ9UBG3 495 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-203ENST00000472892 RCE1Q9Y256 329 aa13.34□□□□□ -0.27
VTI1A-203ENST00000472892 IGKV1D-42A0A075B6H8 117 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 IGHV1-18A0A0C4DH31 117 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 RPL36A-HNRNPH2H7BZ11 118 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 GPRIN2O60269 458 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 ZNF43P17038 809 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 CLDN17P56750 224 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 ADRM1Q16186 407 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 C3orf36Q3SXR2 165 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 GLIPR1L2Q4G1C9 344 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 AGKQ53H12 422 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 FAM69AQ5T7M9 428 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 FAM91A1Q658Y4 838 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 ANKRD16Q6P6B7 361 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 ULK3Q6PHR2 472 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 CLEC2AQ6UVW9 174 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 DLEU7Q6UYE1 221 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 KRT73Q86Y46 540 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 FAM169BQ8N8A8 192 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 HTRA1Q92743 480 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 SLC38A4Q969I6 547 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 ALKBH3Q96Q83 286 aaPredicted RBP13.33□□□□□ -0.28
VTI1A-203ENST00000472892 SLC38A2Q96QD8 506 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 PRR14Q9BWN1 585 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 SEC14L4Q9UDX3 406 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 CORO2BQ9UQ03 480 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 PMF1-BGLAPU3KQ54 211 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 CR1P17927 2039 aa13.33□□□□□ -0.28
VTI1A-203ENST00000472892 ABCA1O95477 2261 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 TRAV36DV7A0A075B6V5 113 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 PRORSD1PA6NEY8 169 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 EVPLLA8MZ36 301 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 AIM2O14862 343 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 F12P00748 615 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-203ENST00000472892 SLC6A2P23975 617 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 GTF2E2P29084 291 aaKnown RBP13.32□□□□□ -0.28
VTI1A-203ENST00000472892 EFNA4P52798 201 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 SH3BGRP55822 239 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-203ENST00000472892 UBE2NP61088 152 aaKnown RBP13.32□□□□□ -0.28
VTI1A-203ENST00000472892 ROR2Q01974 943 aaKnown RBP13.32□□□□□ -0.28
VTI1A-203ENST00000472892 LOXL1Q08397 574 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-203ENST00000472892 SCARB2Q14108 478 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 SQLEQ14534 574 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 TTMPQ5BVD1 217 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 ALG10BQ5I7T1 473 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 HMBOX1Q6NT76 420 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 H1FNTQ75WM6 255 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-203ENST00000472892 ZNF525Q8N782 197 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 BHLHE22Q8NFJ8 381 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-203ENST00000472892 OR6S1Q8NH40 331 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 TNFRSF13CQ96RJ3 184 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 KATNB1Q9BVA0 655 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 NELFAQ9H3P2 528 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 HEATR1Q9H583 2144 aaKnown RBP13.32□□□□□ -0.28
VTI1A-203ENST00000472892 MOV10Q9HCE1 1003 aaKnown RBP13.32□□□□□ -0.28
VTI1A-203ENST00000472892 YAE1D1Q9NRH1 226 aa13.32□□□□□ -0.28
VTI1A-203ENST00000472892 A0A087WUJ7 227 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 A0A096LPE4 126 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 A0A1W2PPZ6 126 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 MS4A18H0YCH9 400 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 M0R082 166 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 TPST2O60704 377 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 SLC43A1O75387 559 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 SERPINB7O75635 380 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 IGLV1-44P01699 117 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 CRYAAP02489 173 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 SLC25A16P16260 332 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 GRPRP30550 384 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 ARF1P84077 181 aaKnown RBP13.31□□□□□ -0.28
VTI1A-203ENST00000472892 C1DQ13901 141 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms