RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 HLA-DOBP13765 273 aa17.16■□□□□ 0.34
PSPC1-203ENST00000471658 AHCYP23526 432 aa17.16■□□□□ 0.34
PSPC1-203ENST00000471658 RPS3AP61247 264 aaKnown RBP17.16■□□□□ 0.34
PSPC1-203ENST00000471658 NPRL3Q12980 569 aa17.16■□□□□ 0.34
PSPC1-203ENST00000471658 RFX4Q33E94 735 aa17.16■□□□□ 0.34
PSPC1-203ENST00000471658 EMC4Q5J8M3 183 aa17.16■□□□□ 0.34
PSPC1-203ENST00000471658 PAQR6Q6TCH4 344 aa17.16■□□□□ 0.34
PSPC1-203ENST00000471658 SCAIQ8N9R8 606 aa17.16■□□□□ 0.34
PSPC1-203ENST00000471658 BBC3Q96PG8 261 aaPredicted RBP17.16■□□□□ 0.34
PSPC1-203ENST00000471658 TSSK6Q9BXA6 273 aa17.16■□□□□ 0.34
PSPC1-203ENST00000471658 GABARAPL3Q9BY60 117 aa17.16■□□□□ 0.34
PSPC1-203ENST00000471658 SVILO95425 2214 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 OR14I1A6ND48 311 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 AQP7P3A6NL99 342 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 SERPINI2O75830 405 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 NDUFB2O95178 105 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 RCBTB2O95199 551 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 PON3Q15166 354 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 PTGES3Q15185 160 aaKnown RBP17.15■□□□□ 0.34
PSPC1-203ENST00000471658 ZNF239Q16600 458 aaKnown RBP17.15■□□□□ 0.34
PSPC1-203ENST00000471658 WLSQ5T9L3 541 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 GFRALQ6UXV0 394 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 CLDN22Q8N7P3 220 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 OR4Q3Q8NH05 313 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 CPT1CQ8TCG5 803 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 TIGARQ9NQ88 270 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 B3GALT5Q9Y2C3 310 aa17.15■□□□□ 0.34
PSPC1-203ENST00000471658 CLCA1A8K7I4 914 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 RNF13O43567 381 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 EIF1BO60739 113 aaKnown RBP17.14■□□□□ 0.33
PSPC1-203ENST00000471658 OR6A2O95222 327 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 ESRRGP62508 458 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 ALG10Q5BKT4 473 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 TMEM225Q6GV28 225 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 ACSM5Q6NUN0 579 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 ZNF585AQ6P3V2 769 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 CHMP1BQ7LBR1 199 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 FNDC9Q8TBE3 224 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 CPNE4Q96A23 557 aaPredicted RBP17.14■□□□□ 0.33
PSPC1-203ENST00000471658 ZNF570Q96NI8 536 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 NAA11Q9BSU3 229 aaPredicted RBP17.14■□□□□ 0.33
PSPC1-203ENST00000471658 GRIP2Q9C0E4 1043 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 TBC1D23Q9NUY8 699 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 FAM118AQ9NWS6 357 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 B3GAT1Q9P2W7 334 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 IGSF10Q6WRI0 2623 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 SPTA1P02549 2419 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 DNPH1O43598 174 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 AQP8O94778 261 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 PPP1R3DO95685 299 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 PLGP00747 810 aaPredicted RBP17.14■□□□□ 0.33
PSPC1-203ENST00000471658 TPOP07202 933 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 RPL4P36578 427 aaKnown RBP17.14■□□□□ 0.33
PSPC1-203ENST00000471658 GIPRP48546 466 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 CTXN1P60606 82 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 ERVK-25P63136 954 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 PUDPQ08623 228 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 ZP4Q12836 540 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 GINS1Q14691 196 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 C6orf52Q5T4I8 152 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 PM20D2Q8IYS1 436 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 TEX47Q8TBZ9 253 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 CYGBQ8WWM9 190 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 ZNF775Q96BV0 537 aaPredicted RBP17.14■□□□□ 0.33
PSPC1-203ENST00000471658 ZHX1-C8orf76Q96EF9 292 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 ADAM18Q9Y3Q7 739 aa17.14■□□□□ 0.33
PSPC1-203ENST00000471658 E9PQ18 207 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 H0YJX3 145 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 BCKDKO14874 412 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 SYNGR4O95473 234 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 CLIC3O95833 236 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 TGM6O95932 706 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 CDH2P19022 906 aaPredicted RBP17.13■□□□□ 0.33
PSPC1-203ENST00000471658 PRPS1P60891 318 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 CDK5Q00535 292 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 NHLRC1Q6VVB1 395 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 FCRLAQ7L513 359 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 GPAT4Q86UL3 456 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 WDFY1Q8IWB7 410 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 DHRSXQ8N5I4 330 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 ADPRHL1Q8NDY3 354 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 ZPLD1Q8TCW7 415 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 RDH12Q96NR8 316 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 TRIB1Q96RU8 372 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 KATNB1Q9BVA0 655 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 IFT27Q9BW83 186 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 INIPQ9NRY2 104 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 IER3IP1Q9Y5U9 82 aa17.13■□□□□ 0.33
PSPC1-203ENST00000471658 ZAR1LA6NP61 321 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 BHLHE40O14503 412 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 EDN3P14138 238 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 ABOP16442 354 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 SLC6A6P31641 620 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 ADARB1P78563 741 aaKnown RBP17.12■□□□□ 0.33
PSPC1-203ENST00000471658 ANKDD1AQ495B1 522 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 SLC35F1Q5T1Q4 408 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 ADGRE4PQ86SQ3 457 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 CD163Q86VB7 1156 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 ABHD3Q8WU67 409 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 TXNDC15Q96J42 360 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms