RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 NIPAL3Q6P499 406 aa14.23□□□□□ -0.13
COL9A3-208ENST00000469802 KRT73Q86Y46 540 aa14.23□□□□□ -0.13
COL9A3-208ENST00000469802 ADPRHL1Q8NDY3 354 aa14.23□□□□□ -0.13
COL9A3-208ENST00000469802 ANKK1Q8NFD2 765 aa14.23□□□□□ -0.13
COL9A3-208ENST00000469802 OR10H5Q8NGA6 315 aa14.23□□□□□ -0.13
COL9A3-208ENST00000469802 MAGEE2Q8TD90 523 aaPredicted RBP14.23□□□□□ -0.13
COL9A3-208ENST00000469802 DNAJA4Q8WW22 397 aaPredicted RBP14.23□□□□□ -0.13
COL9A3-208ENST00000469802 BCL2L2Q92843 193 aaPredicted RBP14.23□□□□□ -0.13
COL9A3-208ENST00000469802 SLC38A4Q969I6 547 aa14.23□□□□□ -0.13
COL9A3-208ENST00000469802 TAAR8Q969N4 342 aa14.23□□□□□ -0.13
COL9A3-208ENST00000469802 SLC25A36Q96CQ1 311 aa14.23□□□□□ -0.13
COL9A3-208ENST00000469802 ADAD1Q96M93 576 aaKnown RBP14.23□□□□□ -0.13
COL9A3-208ENST00000469802 ZNF317Q96PQ6 595 aaPredicted RBP14.23□□□□□ -0.13
COL9A3-208ENST00000469802 SPATA5L1Q9BVQ7 753 aa14.23□□□□□ -0.13
COL9A3-208ENST00000469802 KLHL14Q9P2G3 628 aa14.23□□□□□ -0.13
COL9A3-208ENST00000469802 CRNNQ9UBG3 495 aaPredicted RBP14.23□□□□□ -0.13
COL9A3-208ENST00000469802 RPS6KB2Q9UBS0 482 aa14.23□□□□□ -0.13
COL9A3-208ENST00000469802 IGHV4-30-2A0A087WSY4 118 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 A0A0B4J2E0 115 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 IGHV1-18A0A0C4DH31 117 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 A0A1B0GX12 115 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 HMGB1P1B2RPK0 211 aaPredicted RBP14.22□□□□□ -0.13
COL9A3-208ENST00000469802 RPL36A-HNRNPH2H7BZ11 118 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 M0R082 166 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 AIM2O14862 343 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 OR2T1O43869 369 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 SSX4O60224 188 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 CDH2P19022 906 aaPredicted RBP14.22□□□□□ -0.13
COL9A3-208ENST00000469802 NUDT6P53370 316 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 SH3BGRP55822 239 aaPredicted RBP14.22□□□□□ -0.13
COL9A3-208ENST00000469802 PCBP3P57721 371 aaKnown RBP14.22□□□□□ -0.13
COL9A3-208ENST00000469802 ALG10BQ5I7T1 473 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 ULK3Q6PHR2 472 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 PTOV1Q86YD1 416 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 KDM8Q8N371 416 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 DPP10Q8N608 796 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 HIPK4Q8NE63 616 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 ZNF417Q8TAU3 575 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 DYDC1Q8WWB3 177 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 OXGR1Q96P68 337 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 SLC38A2Q96QD8 506 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 ZNF587Q96SQ5 575 aaPredicted RBP14.22□□□□□ -0.13
COL9A3-208ENST00000469802 INTS9Q9NV88 658 aaKnown RBP14.22□□□□□ -0.13
COL9A3-208ENST00000469802 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.22□□□□□ -0.13
COL9A3-208ENST00000469802 ADAM21Q9UKJ8 722 aa14.22□□□□□ -0.13
COL9A3-208ENST00000469802 TRAV36DV7A0A075B6V5 113 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 LOC102725191A0A1B0GVB3 256 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 PRORSD1PA6NEY8 169 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 TRAF3IP2O43734 574 aaPredicted RBP14.21□□□□□ -0.13
COL9A3-208ENST00000469802 TPST2O60704 377 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 CRLF1O75462 422 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 KRT33AO76009 404 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 IGLV1-44P01699 117 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 ZNF43P17038 809 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 PAX7P23759 505 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 SLC6A2P23975 617 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 GTF2E2P29084 291 aaKnown RBP14.21□□□□□ -0.13
COL9A3-208ENST00000469802 GRPRP30550 384 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 APOBEC3AP31941 199 aaPredicted RBP14.21□□□□□ -0.13
COL9A3-208ENST00000469802 CLDN17P56750 224 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 RGS8P57771 180 aaPredicted RBP14.21□□□□□ -0.13
COL9A3-208ENST00000469802 C3orf36Q3SXR2 165 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 RUNDC3AQ59EK9 446 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 ANKRD16Q6P6B7 361 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 TMEM123Q8N131 208 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 BHLHE22Q8NFJ8 381 aaPredicted RBP14.21□□□□□ -0.13
COL9A3-208ENST00000469802 OR6S1Q8NH40 331 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 CKAP2Q8WWK9 683 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 SLC41A3Q96GZ6 507 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 MAGEB18Q96M61 343 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 WFDC6Q9BQY6 131 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 KATNB1Q9BVA0 655 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 PRR14Q9BWN1 585 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 RABEP2Q9H5N1 569 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 MOKQ9UQ07 419 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 ATP23Q9Y6H3 246 aa14.21□□□□□ -0.13
COL9A3-208ENST00000469802 A0A087WUJ7 227 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 KIAA1324LA8MWY0 1029 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-208ENST00000469802 EVPLLA8MZ36 301 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 CD5LO43866 347 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 MFN2O95140 757 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 AQP1P29972 269 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 DSCR9P59020 149 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 ROR2Q01974 943 aaKnown RBP14.2□□□□□ -0.14
COL9A3-208ENST00000469802 SWI5Q1ZZU3 235 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 MST1LQ2TV78 715 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 SWT1Q5T5J6 900 aaKnown RBP14.2□□□□□ -0.14
COL9A3-208ENST00000469802 NET1Q7Z628 596 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-208ENST00000469802 DHDDSQ86SQ9 333 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 RETREG3Q86VR2 466 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 FAM169BQ8N8A8 192 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 HTRA1Q92743 480 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 SLC47A1Q96FL8 570 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 ZNF607Q96SK3 696 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 RHNO1Q9BSD3 238 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 EVA1AQ9H8M9 152 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 VIPAS39Q9H9C1 493 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 LEF1Q9UJU2 399 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-208ENST00000469802 ANGPT4Q9Y264 503 aa14.2□□□□□ -0.14
COL9A3-208ENST00000469802 TLX2O43763 284 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms