RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 MNDAP41218 407 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 VEGFCP49767 419 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 CLDN6P56747 220 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 PSMA6P60900 246 aaKnown RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 SEC61A1P61619 476 aaKnown RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 RNASE12Q5GAN4 147 aaKnown RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 SFRP4Q6FHJ7 346 aaPredicted RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 HEPHL1Q6MZM0 1159 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 UNQ9370/PRO34162Q6UXP9 181 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 LRRC69Q6ZNQ3 347 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 ERN2Q76MJ5 926 aaKnown RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 HIST3H2AQ7L7L0 130 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 ZNF547Q8IVP9 402 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 SLC25A45Q8N413 288 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 MEIOBQ8N635 442 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 AMER3Q8N944 861 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 OR5T2Q8NGG2 359 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 C15orf40Q8WUR7 153 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 THEM6Q8WUY1 208 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 ASB13Q8WXK3 278 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 HIST1H2ACQ93077 130 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 ZG16BQ96DA0 208 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 C16orf58Q96GQ5 468 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 C4orf36Q96KX1 117 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 CXorf58Q96LI9 332 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 DCBLD2Q96PD2 775 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 CD180Q99467 661 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 TBX5Q99593 518 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 MRI1Q9BV20 369 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 ADGRL4Q9HBW9 690 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 NOX3Q9HBY0 568 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 SIDT1Q9NXL6 827 aaKnown RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 IL36AQ9UHA7 158 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 FLVCR2Q9UPI3 526 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 RCE1Q9Y256 329 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 SLC35A3Q9Y2D2 325 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 KLF2Q9Y5W3 355 aaPredicted RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 MPTX1A8MV57 137 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 J3QLW9 94 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 PDCD5O14737 125 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 RRP8O43159 456 aaKnown RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 SUSD5O60279 629 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 PIAS2O75928 621 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 KRT33AO76009 404 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 AQP8O94778 261 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 AGR2O95994 175 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 RPN2P04844 631 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 LPLP06858 475 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 GP1BAP07359 652 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 ZNF19P17023 458 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 SLC2A5P22732 501 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 ATP5A1P25705 553 aaKnown RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 TEAD1P28347 426 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 CD96P40200 585 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 SSR2P43308 183 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 FXYD6P3P58550 94 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 ILF3Q12906 894 aaKnown RBP eCLIP8.79□□□□□ -1
HDAC3-205ENST00000469550 SLC9A5Q14940 896 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 CEBPEQ15744 281 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 PRSS45Q7RTY3 260 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 PDZD9Q8IXQ8 264 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 CMTM4Q8IZR5 234 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 SYS1Q8N2H4 156 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 TTLQ8NG68 377 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 OR5AR1Q8NGP9 310 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 FANK1Q8TC84 345 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 ZFPM2Q8WW38 1151 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 CNOT9Q92600 299 aaKnown RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 SMIM19Q96E16 107 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 ZNF416Q9BWM5 594 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 HCAR1Q9BXC0 346 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 C1QTNF6Q9BXI9 259 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 CHIAQ9BZP6 476 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 DNTTIP1Q9H147 329 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 OR10A4Q9H209 315 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 AUNIPQ9H7T9 357 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 MTHFD2LQ9H903 347 aaPredicted RBP8.79□□□□□ -1
HDAC3-205ENST00000469550 BEX1Q9HBH7 125 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 NRIP3Q9NQ35 241 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 PCDHB16Q9NRJ7 776 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 ZNF175Q9Y473 711 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 HS3ST3A1Q9Y663 406 aa8.79□□□□□ -1
HDAC3-205ENST00000469550 A0A1B0GW55 424 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 FEZF1A0PJY2 475 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 ANKRD20A5PA0PJZ0 165 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 ZC3H12DA2A288 527 aaKnown RBP8.78□□□□□ -1
HDAC3-205ENST00000469550 CDHR4A6H8M9 788 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 LRIT2A6NDA9 550 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 DUXAA6NLW8 204 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 D6RAR5 112 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 H7BY64 318 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 KPNA3O00505 521 aaPredicted RBP8.78□□□□□ -1
HDAC3-205ENST00000469550 ARPC1BO15143 372 aaKnown RBP8.78□□□□□ -1
HDAC3-205ENST00000469550 OR1F1O43749 312 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 BRINP1O60477 761 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 DXOO77932 396 aaKnown RBP8.78□□□□□ -1
HDAC3-205ENST00000469550 NDUFB6O95139 128 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 MT-CO3P00414 261 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 DUX4L2P0CJ85 424 aa8.78□□□□□ -1
HDAC3-205ENST00000469550 DUX4L3P0CJ86 424 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms