RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 OXGR1Q96P68 337 aa10.61□□□□□ -0.71
VPS13D-204ENST00000469054 RBM24Q9BX46 236 aaKnown RBP10.61□□□□□ -0.71
VPS13D-204ENST00000469054 NPDC1Q9NQX5 325 aaPredicted RBP10.61□□□□□ -0.71
VPS13D-204ENST00000469054 C20orf141Q9NUB4 165 aa10.61□□□□□ -0.71
VPS13D-204ENST00000469054 B3GAT1Q9P2W7 334 aa10.61□□□□□ -0.71
VPS13D-204ENST00000469054 ZNF229Q9UJW7 825 aa10.61□□□□□ -0.71
VPS13D-204ENST00000469054 NOSIPQ9Y314 301 aaKnown RBP10.61□□□□□ -0.71
VPS13D-204ENST00000469054 FLVCR1Q9Y5Y0 555 aa10.61□□□□□ -0.71
VPS13D-204ENST00000469054 LOC102725191A0A1B0GVB3 256 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 MS4A18H0YCH9 400 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 PLPP3O14495 311 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 PIP5K1CO60331 668 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 MRPL33O75394 65 aaKnown RBP10.6□□□□□ -0.71
VPS13D-204ENST00000469054 OR7A10O76100 309 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 HIST1H2ABP04908 130 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 ASAH2BP0C7U1 165 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 RAP2AP10114 183 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 NQO1P15559 274 aaKnown RBP10.6□□□□□ -0.71
VPS13D-204ENST00000469054 ZNF43P17038 809 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 FUT1P19526 365 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 UQCRC1P31930 480 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 NTF4P34130 210 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 OR3A2P47893 321 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 SPIBQ01892 262 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 PRKCDQ05655 676 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 MS4A18Q3C1V0 323 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 SP5Q6BEB4 398 aaPredicted RBP10.6□□□□□ -0.71
VPS13D-204ENST00000469054 PODNL1Q6PEZ8 512 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 TBPL2Q6SJ96 375 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 TFAP2EQ6VUC0 442 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 MBOAT2Q6ZWT7 520 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 CREB3L2Q70SY1 520 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 HIST3H2AQ7L7L0 130 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 RRM2BQ7LG56 351 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 SPATA24Q86W54 205 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 EPHX4Q8IUS5 362 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 ADGRG5Q8IZF4 528 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 LRRC17Q8N6Y2 441 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 ZIC4Q8N9L1 334 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 OR52J3Q8NH60 311 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 CANT1Q8WVQ1 401 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 LIPHQ8WWY8 451 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 HIST1H2ACQ93077 130 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 TMEM45BQ96B21 275 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 ZNF385AQ96PM9 386 aaKnown RBP10.6□□□□□ -0.71
VPS13D-204ENST00000469054 PARPBPQ9NWS1 579 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 AURKCQ9UQB9 309 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 TESMINQ9Y4I5 508 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 DOCK7Q96N67 2140 aa10.6□□□□□ -0.71
VPS13D-204ENST00000469054 ARHGAP21Q5T5U3 1957 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 TRBV4-1A0A0J9YWV2 114 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 TCRBV3S1A0A5B6 114 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 DHRS12A0PJE2 317 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 KRT36O76013 467 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 OR6A2O95222 327 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 GADD45GO95257 159 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 ADORA3P0DMS8 318 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 IFI30P13284 250 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 POU2F1P14859 743 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 HOXB6P17509 224 aaKnown RBP10.59□□□□□ -0.71
VPS13D-204ENST00000469054 AHCYP23526 432 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 EDNRAP25101 427 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 COL8A1P27658 744 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 RRM2P31350 389 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 PCYT1AP49585 367 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 IL1RL1Q01638 556 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 PUDPQ08623 228 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 FAM27E3Q08E93 113 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 ZP4Q12836 540 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 FGD3Q5JSP0 725 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 BEND4Q6ZU67 534 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 PXKQ7Z7A4 578 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 KIF18BQ86Y91 864 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 UEVLDQ8IX04 471 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 ZNF100Q8IYN0 542 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 CDK20Q8IZL9 346 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 ACBD4Q8NC06 268 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 APH1AQ96BI3 265 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 BPIFA2Q96DR5 249 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 FUZQ9BT04 418 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 CHID1Q9BWS9 393 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 ENKD1Q9H0I2 346 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 FANCFQ9NPI8 374 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 GALNT8Q9NY28 637 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 ELOVL5Q9NYP7 299 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 PRSS50Q9UI38 385 aa10.59□□□□□ -0.71
VPS13D-204ENST00000469054 SPTBN1Q01082 2364 aaKnown RBP10.59□□□□□ -0.71
VPS13D-204ENST00000469054 MED12LQ86YW9 2145 aa10.58□□□□□ -0.72
VPS13D-204ENST00000469054 BLOC1S5-TXNDC5H3BN57 136 aa10.58□□□□□ -0.72
VPS13D-204ENST00000469054 CNOT4O95628 575 aaKnown RBP10.58□□□□□ -0.72
VPS13D-204ENST00000469054 HPRP00739 348 aa10.58□□□□□ -0.72
VPS13D-204ENST00000469054 HLA-DOBP13765 273 aa10.58□□□□□ -0.72
VPS13D-204ENST00000469054 IGFBP2P18065 325 aa10.58□□□□□ -0.72
VPS13D-204ENST00000469054 CD79BP40259 229 aa10.58□□□□□ -0.72
VPS13D-204ENST00000469054 PEX19P40855 299 aa10.58□□□□□ -0.72
VPS13D-204ENST00000469054 ERFP50548 548 aa10.58□□□□□ -0.72
VPS13D-204ENST00000469054 HMGA2P52926 109 aa10.58□□□□□ -0.72
VPS13D-204ENST00000469054 C1DQ13901 141 aaKnown RBP10.58□□□□□ -0.72
VPS13D-204ENST00000469054 SEC23BQ15437 767 aa10.58□□□□□ -0.72
VPS13D-204ENST00000469054 EXOC3L2Q2M3D2 409 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms