RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 TMPRSS11FQ6ZWK6 438 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 H1FNTQ75WM6 255 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-216ENST00000468949 FCRLAQ7L513 359 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 SLC46A3Q7Z3Q1 461 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 HDDC2Q7Z4H3 204 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 ZER1Q7Z7L7 766 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 GALNT5Q7Z7M9 940 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 TMEM179BQ7Z7N9 219 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 MEX3DQ86XN8 651 aaKnown RBP7.28□□□□□ -1.24
HDAC6-216ENST00000468949 EPHX4Q8IUS5 362 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 UEVLDQ8IX04 471 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 SLC43A2Q8N370 569 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 GALNT4Q8N4A0 578 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 PACRGLQ8N7B6 248 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 ST6GALNAC3Q8NDV1 305 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 ADPRHL1Q8NDY3 354 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 ZNF555Q8NEP9 628 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 OR51A7Q8NH64 312 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 FAM57AQ8TBR7 257 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 WDYHV1Q96HA8 205 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 MOGAT1Q96PD6 335 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 PSD2Q9BQI7 771 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 FUZQ9BT04 418 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 PTDSS2Q9BVG9 487 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 DGCR6LQ9BY27 220 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 SRXN1Q9BYN0 137 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 TP63Q9H3D4 680 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-216ENST00000468949 RIBC2Q9H4K1 309 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 SMURF2Q9HAU4 748 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 MRPL39Q9NYK5 338 aaKnown RBP7.28□□□□□ -1.24
HDAC6-216ENST00000468949 PLA2G2EQ9NZK7 142 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 KLHL9Q9P2J3 617 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 NKX1-2Q9UD57 310 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-216ENST00000468949 SH3BGRL2Q9UJC5 107 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 RASD1Q9Y272 281 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 B3GALT5Q9Y2C3 310 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 ZNF175Q9Y473 711 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 CDH10Q9Y6N8 788 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 UBR5O95071 2799 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-216ENST00000468949 IGHV3-15A0A0B4J1V0 119 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 TRGV8A0A0C4DH27 118 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 AQP7P3A6NL99 342 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 LRRN3E7EW58 273 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 SOCS2O14508 198 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 CDC42EP2O14613 210 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 CASQ2O14958 399 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 EFNA2O43921 213 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 VAMP5O95183 116 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 HOXD4P09016 255 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF43P17038 809 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 FUT4P22083 530 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 VHLP40337 213 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 GSSP48637 474 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 HSPA13P48723 471 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 DAP3P51398 398 aaKnown RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 RPS6KA3P51812 740 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 POU3F1Q03052 451 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 RASGEF1BQ0VAM2 473 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 TOP3AQ13472 1001 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 RNPS1Q15287 305 aaKnown RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 IGFBP7Q16270 282 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 CTU2Q2VPK5 515 aaKnown RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 SLC36A3Q495N2 470 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 GXYLT1Q4G148 440 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 ACSF3Q4G176 576 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 CLEC12AQ5QGZ9 265 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 TMEM201Q5SNT2 666 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 C1orf185Q5T7R7 199 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 OGFRL1Q5TC84 451 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 EEF1A1P5Q5VTE0 462 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 OR2A2Q6IF42 318 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 FAHD1Q6P587 224 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 B3GNT6Q6ZMB0 384 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF620Q6ZNG0 422 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 RASSF6Q6ZTQ3 369 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 JAZF1Q86VZ6 243 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 FNDC9Q8TBE3 224 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 ZPLD1Q8TCW7 415 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF845Q96IR2 970 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 PLEKHA8Q96JA3 519 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 ADGRG7Q96K78 797 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 BARD1Q99728 777 aaKnown RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 TM9SF2Q99805 663 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 NIPSNAP1Q9BPW8 284 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 TUBA1CQ9BQE3 449 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 TACO1Q9BSH4 297 aaKnown RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 IFT27Q9BW83 186 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 POLDIP3Q9BY77 421 aaKnown RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 OR52D1Q9H346 318 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 INIPQ9NRY2 104 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 PNPLA3Q9NST1 481 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 SMPD3Q9NY59 655 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 USE1Q9NZ43 259 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 KLHL13Q9P2N7 655 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 NOX1Q9Y5S8 564 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 MAGED1Q9Y5V3 778 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-216ENST00000468949 EML6Q6ZMW3 1958 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 TENM4Q6N022 2769 aa7.27□□□□□ -1.25
HDAC6-216ENST00000468949 A0A1W2PNV4 684 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 FTCDNL1E5RQL4 147 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms