RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ADH6P28332 368 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 APOBEC1P41238 236 aaKnown RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 EIF1P41567 113 aaKnown RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 ARHGDIAP52565 204 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 UGT2B15P54855 530 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TPTEP56180 551 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 EGR4Q05215 589 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TRIP10Q15642 601 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 MICAQ29983 383 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TBRG1Q3YBR2 411 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 WIPI1Q5MNZ9 446 aaPredicted RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 GTF2IRD2BQ6EKJ0 949 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF730Q6ZMV8 503 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 ALPK2Q86TB3 2170 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 GTF2IRD2Q86UP8 949 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 ZDHHC13Q8IUH4 622 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 CCDC36Q8IYA8 594 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 GTPBP8Q8N3Z3 284 aaPredicted RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 FAM109AQ8N4B1 249 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 ASCC1Q8N9N2 400 aaKnown RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 OR9Q2Q8NGE9 314 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 PFN4Q8NHR9 129 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TMEM239Q8WW34 195 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 ACOT11Q8WXI4 607 aaPredicted RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 DNAJA3Q96EY1 480 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 SLC25A18Q9H1K4 315 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TSPAN10Q9H1Z9 355 aaPredicted RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TMEM185BQ9H7F4 350 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 PDP1Q9P0J1 537 aaPredicted RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 DIMT1Q9UNQ2 313 aaKnown RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TMED7Q9Y3B3 224 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 IGKV1D-42A0A075B6H8 117 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TMEM72A0PK05 275 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 ZC3H12DA2A288 527 aaKnown RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 C7orf72A4D263 438 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 G3V2T6 193 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 SUSD5O60279 629 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 PIP5K1CO60331 668 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 OR10H3O60404 316 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF17P17021 662 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 LY6DQ14210 128 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TMEM44Q2T9K0 475 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 OTUD3Q5T2D3 398 aaPredicted RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 LPCAT4Q643R3 524 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 C3orf33Q6P1S2 294 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 SHQ1Q6PI26 577 aaKnown RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TTC33Q6PID6 262 aaPredicted RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 RRM2BQ7LG56 351 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 MAMDC2Q7Z304 686 aaPredicted RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 STX12Q86Y82 276 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 NRMQ8IXM6 262 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 Q8NA96 180 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 ATP6V1C2Q8NEY4 427 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 OR4K5Q8NGD3 323 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 OR5K1Q8NHB7 308 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TRUB1Q8WWH5 349 aaKnown RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 PNPLA2Q96AD5 504 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 PIGQQ9BRB3 760 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 MROQ9BYG7 248 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 OR2B2Q9GZK3 357 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 OR11A1Q9GZK7 315 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 WNT5BQ9H1J7 359 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 NARFLQ9H6Q4 476 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 ZDHHC11Q9H8X9 412 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 MEPEQ9NQ76 525 aaPredicted RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TIGARQ9NQ88 270 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 C20orf141Q9NUB4 165 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 MRPS18CQ9Y3D5 142 aaKnown RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 ERVH48-1M5A8F1 160 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 CCNB2O95067 398 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 OPN1LWP04000 364 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 RBM34P42696 430 aaKnown RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 B3GALT5-AS1P59052 145 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 GK3PQ14409 553 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SLC10A1Q14973 349 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ANKRD34AQ69YU3 496 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 RPUSD3Q6P087 351 aaKnown RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 PLBD1Q6P4A8 553 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 PCSK4Q6UW60 755 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 C16orf54Q6UWD8 224 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 MBOAT2Q6ZWT7 520 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 MEX3DQ86XN8 651 aaKnown RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SVOPLQ8N434 492 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 OR10G2Q8NGC3 310 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 GRPEL2Q8TAA5 225 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 MARVELD3Q96A59 401 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SFXN2Q96NB2 322 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SLC29A1Q99808 456 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 DEFB127Q9H1M4 99 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SLC6A15Q9H2J7 730 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF696Q9H7X3 374 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SLC6A5Q9Y345 797 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF337Q9Y3M9 751 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 LIPGQ9Y5X9 500 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 LINC01387J3KSC0 135 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SOCS2O14508 198 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 EI24O14681 340 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 WISP2O76076 250 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 TNFAIP8O95379 198 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 GASTP01350 101 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms