RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 TET2Q6N021 2002 aaPredicted RBP2.32□□□□□ -2.04
SMC4-207ENST00000467263 TMEM150BA6NC51 233 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 C12orf77C9JDV5 145 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 F5H6K3 240 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 ANGPTL7O43827 346 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 ATP5LO75964 103 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 TSPY4P0CV99 314 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 TSPY10P0CW01 314 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 KRT13P13646 458 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 HPGDP15428 266 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 TBPP20226 339 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 CNR1P21554 472 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 LAP3P28838 519 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 ACTA2P62736 377 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 ACTC1P68032 377 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 KLRC3Q07444 240 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 ASPHQ12797 758 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 SMARCB1Q12824 385 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 LY6EQ16553 131 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 TPD52L1Q16890 204 aaPredicted RBP2.32□□□□□ -2.04
SMC4-207ENST00000467263 HSP90AA5PQ58FG0 334 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 TMEM255AQ5JRV8 349 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 ZNF546Q86UE3 836 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 THOC6Q86W42 341 aaKnown RBP2.32□□□□□ -2.04
SMC4-207ENST00000467263 ZDHHC21Q8IVQ6 265 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 TTC5Q8N0Z6 440 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 TMEM123Q8N131 208 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 Q8N976 141 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 ACOT4Q8N9L9 421 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 SYT14Q8NB59 555 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 MCOLN3Q8TDD5 553 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 MAIP1Q8WWC4 291 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 TPPP3Q9BW30 176 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 RPH3ALQ9UNE2 315 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 ZNF835Q9Y2P0 537 aa2.32□□□□□ -2.04
SMC4-207ENST00000467263 IGLV11-55A0A075B6I3 123 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 TCRBV9S1A1TA0A576 114 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 C12orf71A8MTZ7 269 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 OXSR1O95747 527 aaPredicted RBP2.31□□□□□ -2.04
SMC4-207ENST00000467263 IGLV2-23P01705 113 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 MRPL3P09001 348 aaKnown RBP2.31□□□□□ -2.04
SMC4-207ENST00000467263 CHI3L1P36222 383 aaPredicted RBP2.31□□□□□ -2.04
SMC4-207ENST00000467263 DDOSTP39656 456 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 CD86P42081 329 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 BPIFB3P59826 476 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 ACVR1Q04771 509 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 PDIA2Q13087 525 aaKnown RBP2.31□□□□□ -2.04
SMC4-207ENST00000467263 VGLL4Q14135 290 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 OXA1LQ15070 435 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 SLC36A3Q495N2 470 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 DMRTC1Q5HYR2 192 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 RIPPLY2Q5TAB7 128 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 C1orf94Q6P1W5 598 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 NLRP9Q7RTR0 991 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 PCP2Q8IVA1 136 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 CCDC50Q8IVM0 306 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 ACOT11Q8WXI4 607 aaPredicted RBP2.31□□□□□ -2.04
SMC4-207ENST00000467263 EFHD2Q96C19 240 aaPredicted RBP2.31□□□□□ -2.04
SMC4-207ENST00000467263 DNAJC19Q96DA6 116 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 TM4SF19Q96DZ7 209 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 TGM7Q96PF1 710 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 RIOK2Q9BVS4 552 aaKnown RBP2.31□□□□□ -2.04
SMC4-207ENST00000467263 CAPS2Q9BXY5 557 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 RAB34Q9BZG1 259 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 SLCO1B3Q9NPD5 702 aa2.31□□□□□ -2.04
SMC4-207ENST00000467263 K7EPI3 171 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 PRRG1O14668 218 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 XPO1O14980 1071 aaKnown RBP2.3□□□□□ -2.04
SMC4-207ENST00000467263 DIRAS1O95057 198 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 CCDC130P13994 396 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 CMA1P23946 247 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 UBE2AP49459 152 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 CASP4P49662 377 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 MESDQ14696 234 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 GUCA2BQ16661 112 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 DUSP7Q16829 419 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 TTC23Q5W5X9 447 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 UFD1Q92890 307 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 OXGR1Q96P68 337 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 LRRN3Q9H3W5 708 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 IL26Q9NPH9 171 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.3□□□□□ -2.04
SMC4-207ENST00000467263 RNF14Q9UBS8 474 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 MMP17Q9ULZ9 603 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 TIMM10BQ9Y5J6 103 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 MROH7-TTC4A0A0A0MT08 1334 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 DOCK9Q9BZ29 2069 aa2.3□□□□□ -2.04
SMC4-207ENST00000467263 IQANK1A0A1B0GTG1 560 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 A0A1B0GWJ7 208 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 SERPINE3A8MV23 424 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 A8MXQ7 604 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 PEX7O00628 323 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 SLC31A2O15432 143 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 POLR2DO15514 142 aaKnown RBP2.29□□□□□ -2.04
SMC4-207ENST00000467263 SMPD2O60906 423 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 B4GALT2O60909 372 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 B3GALNT1O75752 331 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 ALDOBP05062 364 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 ZNF286BP0CG31 522 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 HNF1AP20823 631 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms