RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 OPN3Q9H1Y3 402 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-208ENST00000466601 C12orf49Q9H741 205 aa12.85□□□□□ -0.35
DNMT3A-208ENST00000466601 MRPL39Q9NYK5 338 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-208ENST00000466601 ZNF229Q9UJW7 825 aa12.85□□□□□ -0.35
DNMT3A-208ENST00000466601 NOSIPQ9Y314 301 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-208ENST00000466601 KLF2Q9Y5W3 355 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-208ENST00000466601 INTS1Q8N201 2190 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 TRBV4-1A0A0J9YWV2 114 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 A8MXE2 369 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 MS4A18H0YCH9 400 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 HIST1H2ABP04908 130 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 ASAH2BP0C7U1 165 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 HOXB6P17509 224 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 FUT1P19526 365 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 PRKCDQ05655 676 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 POU4F3Q15319 338 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 MS4A18Q3C1V0 323 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 MBOAT2Q6ZWT7 520 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 HIST3H2AQ7L7L0 130 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 GALNT5Q7Z7M9 940 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 CDK20Q8IZL9 346 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 LRRC17Q8N6Y2 441 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 ZNF610Q8N9Z0 462 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 OR9K2Q8NGE7 335 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 HIST1H2ACQ93077 130 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 BPIFA2Q96DR5 249 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 CHID1Q9BWS9 393 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 FLVCR1Q9Y5Y0 555 aa12.84□□□□□ -0.35
DNMT3A-208ENST00000466601 TENM4Q6N022 2769 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 LOC102725191A0A1B0GVB3 256 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 PRSS44E7EML9 344 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 PLPP3O14495 311 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 KRT36O76013 467 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 OR6A2O95222 327 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 ZNF43P17038 809 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 IL1RL1Q01638 556 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 TFF3Q07654 80 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 FBXL19-AS1Q494R0 122 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 CREB3L2Q70SY1 520 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 EPHX4Q8IUS5 362 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 ZIC4Q8N9L1 334 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 LIPHQ8WWY8 451 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 RNASE6Q93091 150 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 LRRC46Q96FV0 321 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 RSRC1Q96IZ7 334 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 FUZQ9BT04 418 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 RBM24Q9BX46 236 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 B3GAT1Q9P2W7 334 aa12.83□□□□□ -0.36
DNMT3A-208ENST00000466601 FLNCQ14315 2725 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 SH3PXD2BA1X283 911 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 TNFRSF11BO00300 401 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 MRPL33O75394 65 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 ADORA3P0DMS8 318 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 MAKP20794 623 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 AHCYP23526 432 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 GRNP28799 593 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 NTF4P34130 210 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 OR3A2P47893 321 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 HMGA2P52926 109 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 PUDPQ08623 228 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 ZP4Q12836 540 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 C1DQ13901 141 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 SEC23BQ15437 767 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 OR2T5Q6IEZ7 315 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 ZNF474Q6S9Z5 364 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 TFAP2EQ6VUC0 442 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 AAED1Q7RTV5 226 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 NANOGNBQ7Z5D8 188 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 STK32CQ86UX6 486 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 MEX3DQ86XN8 651 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 UEVLDQ8IX04 471 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 ZNF100Q8IYN0 542 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 PAPD5Q8NDF8 572 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 OR4K5Q8NGD3 323 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 OR2T29Q8NH02 315 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 TMEM45BQ96B21 275 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 ZNF385AQ96PM9 386 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 ALPK1Q96QP1 1244 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 YY1AP1Q9H869 796 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 CCM2LQ9NUG4 571 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 PARPBPQ9NWS1 579 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 TAS2R5Q9NYW4 299 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 FOXD3Q9UJU5 478 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 TMCC3Q9ULS5 477 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 TMEM5Q9Y2B1 443 aa12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 USP9XQ93008 2570 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-208ENST00000466601 EFCAB9A8MZ26 197 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 C11orf98E9PRG8 122 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 BLOC1S5-TXNDC5H3BN57 136 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 C19orf84I3L1E1 186 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 FKBP6O75344 327 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 HPRP00739 348 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 CST1P01037 141 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 SAGP10523 405 aaPredicted RBP12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 HLA-DOBP13765 273 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 EDNRAP25101 427 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 UQCRC1P31930 480 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 GPR4P46093 362 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 LIMS1P48059 325 aa12.81□□□□□ -0.36
DNMT3A-208ENST00000466601 CCNIQ14094 377 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms