RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CELF2-AS1Q8N7Q2 184 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 OSTF1Q92882 214 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 SLC35B4Q969S0 331 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 RELTQ969Z4 430 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 LAT2Q9GZY6 243 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 HPF1Q9NWY4 346 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 KLK10O43240 276 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 SEC14L5O43304 696 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 IL7P13232 177 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 FPR3P25089 353 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 ASAH1Q13510 395 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 COL28A1Q2UY09 1125 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 GLYR1Q49A26 553 aaPredicted RBP16.88■□□□□ 0.29
CAPN3-209ENST00000466222 ALG10BQ5I7T1 473 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 DDI2Q5TDH0 399 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 ZNF730Q6ZMV8 503 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 ANKK1Q8NFD2 765 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 PFN4Q8NHR9 129 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 FER1L6-AS2Q96M78 137 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 IP6K3Q96PC2 410 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 PROK2Q9HC23 129 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 EXOSC3Q9NQT5 275 aaKnown RBP16.88■□□□□ 0.29
CAPN3-209ENST00000466222 PLA2G3Q9NZ20 509 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 ZNF221Q9UK13 617 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 SF3B6Q9Y3B4 125 aaKnown RBP16.88■□□□□ 0.29
CAPN3-209ENST00000466222 BOD1L1Q8NFC6 3051 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 HTR3AP46098 478 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 ZSWIM7Q19AV6 140 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 CCDC92Q53HC0 331 aaPredicted RBP16.87■□□□□ 0.29
CAPN3-209ENST00000466222 RSBN1Q5VWQ0 802 aaPredicted RBP16.87■□□□□ 0.29
CAPN3-209ENST00000466222 SPINK14Q6IE38 97 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 CD200R1LQ6Q8B3 271 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 OIT3Q8WWZ8 545 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 ACOT11Q8WXI4 607 aaPredicted RBP16.87■□□□□ 0.29
CAPN3-209ENST00000466222 SLC39A7Q92504 469 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 ZNF486Q96H40 463 aaPredicted RBP16.87■□□□□ 0.29
CAPN3-209ENST00000466222 ARHGAP9Q9BRR9 750 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 PLA2G12AQ9BZM1 189 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 TRIM2Q9C040 744 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 EGLN3Q9H6Z9 239 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 KRCC1Q9NPI7 259 aaPredicted RBP16.87■□□□□ 0.29
CAPN3-209ENST00000466222 CNIH4Q9P003 139 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 POU2F3Q9UKI9 436 aa16.87■□□□□ 0.29
CAPN3-209ENST00000466222 TRDV1A0A1B0GX56 115 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 OMPP47874 163 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 ACSM1Q08AH1 577 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 HNRNPA0Q13151 305 aaKnown RBP16.86■□□□□ 0.29
CAPN3-209ENST00000466222 ZNF613Q6PF04 617 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 POMZP3Q6PJE2 187 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 ARSKQ6UWY0 536 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 FAM131AQ6UXB0 335 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 NRARPQ7Z6K4 114 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 NRMQ8IXM6 262 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 GALNT16Q8N428 558 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 OR5W2Q8NH69 310 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 ZNF563Q8TA94 476 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 C3orf49Q96BT1 292 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 JAM3Q9BX67 310 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 SLC22A4Q9H015 551 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 NEK6Q9HC98 313 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 SH2D2AQ9NP31 389 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 C20orf141Q9NUB4 165 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 PLEKHB1Q9UF11 243 aaPredicted RBP16.86■□□□□ 0.29
CAPN3-209ENST00000466222 A0A0G2JMM0 328 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 A0A1W2PPB8 328 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 A0A1W2PRS3 328 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 KIR3DP1A8MWS1 328 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 EIF4E2O60573 245 aaKnown RBP16.86■□□□□ 0.29
CAPN3-209ENST00000466222 FUT1P19526 365 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 TCEA1P23193 301 aaKnown RBP16.86■□□□□ 0.29
CAPN3-209ENST00000466222 PTBP1P26599 531 aaKnown RBP eCLIP16.86■□□□□ 0.29
CAPN3-209ENST00000466222 P2RX1P51575 399 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 OC90Q02509 493 aaPredicted RBP16.86■□□□□ 0.29
CAPN3-209ENST00000466222 C17orf67Q0P5P2 114 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 CARTPTQ16568 116 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 C22orf42Q6IC83 251 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 WDSUB1Q8N9V3 476 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 PAQR8Q8TEZ7 354 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 KCNE4Q8WWG9 221 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 FAM46AQ96IP4 442 aaKnown RBP16.86■□□□□ 0.29
CAPN3-209ENST00000466222 MEPEQ9NQ76 525 aaPredicted RBP16.86■□□□□ 0.29
CAPN3-209ENST00000466222 RPS6KB2Q9UBS0 482 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 FBXL2Q9UKC9 423 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 WIF1Q9Y5W5 379 aa16.86■□□□□ 0.29
CAPN3-209ENST00000466222 TP53I11O14683 189 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 CHP2O43745 196 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 GSTT2P0CG29 244 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 GSTT2BP0CG30 244 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 CD96P40200 585 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 PPP3R1P63098 170 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 JMJD6Q6NYC1 403 aaPredicted RBP16.85■□□□□ 0.29
CAPN3-209ENST00000466222 ULK3Q6PHR2 472 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 METAP1DQ6UB28 335 aaPredicted RBP16.85■□□□□ 0.29
CAPN3-209ENST00000466222 ZNF440Q8IYI8 595 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 OR8D4Q8NGM9 314 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 GPR119Q8TDV5 335 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 TMEM239Q8WW34 195 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 THAP4Q8WY91 577 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 C1GALT1C1Q96EU7 318 aa16.85■□□□□ 0.29
CAPN3-209ENST00000466222 DNAJA3Q96EY1 480 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms