RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CDH2P19022 906 aaPredicted RBP19.08■□□□□ 0.64
LIME1-203ENST00000465591 CD247P20963 164 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 CD40P25942 277 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 PCGF2P35227 344 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 CDH11P55287 796 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 CDH12P55289 794 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 NCALDP61601 193 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 TRMT5Q32P41 509 aaKnown RBP19.08■□□□□ 0.64
LIME1-203ENST00000465591 HIKESHIQ53FT3 197 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 B3GLCTQ6Y288 498 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 Q71RC1 249 aaPredicted RBP19.08■□□□□ 0.64
LIME1-203ENST00000465591 SSX8Q7RTT4 187 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 TSPYL5Q86VY4 417 aaPredicted RBP19.08■□□□□ 0.64
LIME1-203ENST00000465591 RBM45Q8IUH3 476 aaKnown RBP19.08■□□□□ 0.64
LIME1-203ENST00000465591 BHLHE22Q8NFJ8 381 aaPredicted RBP19.08■□□□□ 0.64
LIME1-203ENST00000465591 OR6T1Q8NGN1 323 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 RNF217Q8TC41 542 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 TAMM41Q96BW9 452 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 SLC47A1Q96FL8 570 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 COX4I2Q96KJ9 171 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 TMEM27Q9HBJ8 222 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 CISD1Q9NZ45 108 aaKnown RBP19.08■□□□□ 0.64
LIME1-203ENST00000465591 SLC13A4Q9UKG4 626 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 USP22Q9UPT9 525 aa19.08■□□□□ 0.64
LIME1-203ENST00000465591 TRAV36DV7A0A075B6V5 113 aa19.07■□□□□ 0.64
LIME1-203ENST00000465591 M0R1B8 84 aa19.07■□□□□ 0.64
LIME1-203ENST00000465591 TMCC2O75069 709 aa19.07■□□□□ 0.64
LIME1-203ENST00000465591 THY1P04216 161 aa19.07■□□□□ 0.64
LIME1-203ENST00000465591 VIMP08670 466 aaKnown RBP19.07■□□□□ 0.64
LIME1-203ENST00000465591 CDKN1AP38936 164 aa19.07■□□□□ 0.64
LIME1-203ENST00000465591 ATP5J2P56134 94 aa19.07■□□□□ 0.64
LIME1-203ENST00000465591 CLDN17P56750 224 aa19.07■□□□□ 0.64
LIME1-203ENST00000465591 TMEM108Q6UXF1 575 aa19.07■□□□□ 0.64
LIME1-203ENST00000465591 PIAS4Q8N2W9 510 aaPredicted RBP19.07■□□□□ 0.64
LIME1-203ENST00000465591 C17orf78Q8N4C9 275 aa19.07■□□□□ 0.64
LIME1-203ENST00000465591 MCHR1Q99705 422 aa19.07■□□□□ 0.64
LIME1-203ENST00000465591 FN1P02751 2386 aaKnown RBP19.07■□□□□ 0.64
LIME1-203ENST00000465591 E7EQL1 145 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 LRRN3E7EW58 273 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 AIM2O14862 343 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 OR2T1O43869 369 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 ZNF432O94892 652 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 LYPD3O95274 346 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 HPRP00739 348 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 BGLAPP02818 100 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 GTF2E2P29084 291 aaKnown RBP19.06■□□□□ 0.64
LIME1-203ENST00000465591 MDH1P40925 334 aaKnown RBP19.06■□□□□ 0.64
LIME1-203ENST00000465591 TGFBR3Q03167 851 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 REP15Q6BDI9 236 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 C5orf46Q6UWT4 87 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 WDR88Q6ZMY6 472 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 BIVMQ86UB2 503 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 RANBP3LQ86VV4 465 aaPredicted RBP19.06■□□□□ 0.64
LIME1-203ENST00000465591 CALHM3Q86XJ0 350 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 LRRC58Q96CX6 371 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 OXGR1Q96P68 337 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 MOGAT1Q96PD6 335 aa19.06■□□□□ 0.64
LIME1-203ENST00000465591 TRAF4Q9BUZ4 470 aaPredicted RBP19.06■□□□□ 0.64
LIME1-203ENST00000465591 MS4A18H0YCH9 400 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 TRAF3IP2O43734 574 aaPredicted RBP19.05■□□□□ 0.64
LIME1-203ENST00000465591 NDUFS7O75251 213 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 ZNF43P17038 809 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 PTAFRP25105 342 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 VMACQ2NL98 169 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 MS4A18Q3C1V0 323 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 KLHL17Q6TDP4 642 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 H1FNTQ75WM6 255 aaPredicted RBP19.05■□□□□ 0.64
LIME1-203ENST00000465591 PATL1Q86TB9 770 aaKnown RBP19.05■□□□□ 0.64
LIME1-203ENST00000465591 DTX2Q86UW9 622 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 SNX32Q86XE0 403 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 WDFY1Q8IWB7 410 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 OR1K1Q8NGR3 316 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 VANGL1Q8TAA9 524 aaPredicted RBP19.05■□□□□ 0.64
LIME1-203ENST00000465591 SLC41A3Q96GZ6 507 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 BOD1Q96IK1 185 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 NELFAQ9H3P2 528 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 CCDC134Q9H6E4 229 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 B3GALT5Q9Y2C3 310 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 AMDHD2Q9Y303 409 aa19.05■□□□□ 0.64
LIME1-203ENST00000465591 CPSF4LA6NMK7 179 aaKnown RBP19.04■□□□□ 0.64
LIME1-203ENST00000465591 ZNF587BE7ETH6 402 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 MRASO14807 208 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 SMAD7O15105 426 aaKnown RBP19.04■□□□□ 0.64
LIME1-203ENST00000465591 FMO6PO60774 539 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 KRT33AO76009 404 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 C8BP07358 591 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 HLA-DOBP13765 273 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 HOXB4P17483 251 aaPredicted RBP19.04■□□□□ 0.64
LIME1-203ENST00000465591 CYLC2Q14093 348 aaPredicted RBP19.04■□□□□ 0.64
LIME1-203ENST00000465591 TBRG1Q3YBR2 411 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 ENTPD8Q5MY95 495 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 SLC22A25Q6T423 547 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 LINC00114Q6XXX2 140 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 SLC30A8Q8IWU4 369 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 BCL2L2Q92843 193 aaPredicted RBP19.04■□□□□ 0.64
LIME1-203ENST00000465591 LINC00470Q9BZP3 86 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 EVA1AQ9H8M9 152 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 SELENONQ9NZV5 590 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 MGAT4BQ9UQ53 548 aa19.04■□□□□ 0.64
LIME1-203ENST00000465591 RCE1Q9Y256 329 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms