RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 CRISP3P54108 245 aa19.6■□□□□ 0.73
USP4-208ENST00000464168 SH3BGRP55822 239 aaPredicted RBP19.6■□□□□ 0.73
USP4-208ENST00000464168 ARF1P84077 181 aaKnown RBP19.6■□□□□ 0.73
USP4-208ENST00000464168 BST1Q10588 318 aa19.6■□□□□ 0.73
USP4-208ENST00000464168 LARS2Q15031 903 aaKnown RBP19.6■□□□□ 0.73
USP4-208ENST00000464168 SERPINA11Q86U17 422 aa19.6■□□□□ 0.73
USP4-208ENST00000464168 ZCCHC24Q8N2G6 241 aaKnown RBP19.6■□□□□ 0.73
USP4-208ENST00000464168 ZBTB18Q99592 522 aa19.6■□□□□ 0.73
USP4-208ENST00000464168 PTDSS2Q9BVG9 487 aa19.6■□□□□ 0.73
USP4-208ENST00000464168 WDR55Q9H6Y2 383 aaPredicted RBP19.6■□□□□ 0.73
USP4-208ENST00000464168 ZNF442Q9H7R0 627 aa19.6■□□□□ 0.73
USP4-208ENST00000464168 MOV10Q9HCE1 1003 aaKnown RBP19.6■□□□□ 0.73
USP4-208ENST00000464168 TENM1Q9UKZ4 2725 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 TMEM129A0AVI4 362 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 RPL36A-HNRNPH2H7BZ11 118 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 hCG_2039718K7EN88 272 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 RGS16O15492 202 aaPredicted RBP19.59■□□□□ 0.73
USP4-208ENST00000464168 LILRA1O75019 489 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 BCHEP06276 602 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 TACSTD2P09758 323 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 PNMTP11086 282 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 DAOP14920 347 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 CBR1P16152 277 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 IL2RGP31785 369 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 CRATP43155 626 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 CLDN17P56750 224 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 EGR4Q05215 589 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 RPS26P11Q5JNZ5 115 aaPredicted RBP19.59■□□□□ 0.73
USP4-208ENST00000464168 LIPNQ5VXI9 398 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 GLB1L3Q8NCI6 653 aaPredicted RBP19.59■□□□□ 0.73
USP4-208ENST00000464168 ANKK1Q8NFD2 765 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 SLC25A36Q96CQ1 311 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 SPATA9Q9BWV2 254 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 FBXO9Q9UK97 447 aaPredicted RBP19.59■□□□□ 0.73
USP4-208ENST00000464168 ZNF232Q9UNY5 417 aa19.59■□□□□ 0.73
USP4-208ENST00000464168 ZNF503-AS2A6NEH8 195 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 AHSA1O95433 338 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 IL6P05231 212 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 IGFBP1P08833 259 aaPredicted RBP19.58■□□□□ 0.72
USP4-208ENST00000464168 NPR2P20594 1047 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 EPHA3P29320 983 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 DSTNP60981 165 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 ATG16L1Q676U5 607 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 SVOPLQ8N434 492 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 NEU4Q8WWR8 484 aaPredicted RBP19.58■□□□□ 0.72
USP4-208ENST00000464168 ZNF837Q96EG3 531 aaPredicted RBP19.58■□□□□ 0.72
USP4-208ENST00000464168 KTI12Q96EK9 354 aaPredicted RBP19.58■□□□□ 0.72
USP4-208ENST00000464168 TPT1P8Q9HAU6 139 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 GPR35Q9HC97 309 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 B3GAT1Q9P2W7 334 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 SEC14L4Q9UDX3 406 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 RCE1Q9Y256 329 aa19.58■□□□□ 0.72
USP4-208ENST00000464168 IGHV2OR16-5A0A0B4J2B6 119 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 A0A0G2JPF8 293 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 HNRNPCL2B2RXH8 293 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 HNRNPCL3B7ZW38 293 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 HNRNPCL1O60812 293 aaKnown RBP19.57■□□□□ 0.72
USP4-208ENST00000464168 ZCCHC18P0CG32 403 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 HNRNPCL4P0DMR1 293 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 ZNF43P17038 809 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 RPS5P46782 204 aaKnown RBP19.57■□□□□ 0.72
USP4-208ENST00000464168 HOXC5Q00444 222 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 SPATA21Q7Z572 469 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 ZNF786Q8N393 782 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 C1orf159Q96HA4 380 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 TMEM19Q96HH6 336 aa19.57■□□□□ 0.72
USP4-208ENST00000464168 VSTM5A8MXK1 200 aa19.56■□□□□ 0.72
USP4-208ENST00000464168 FZD7O75084 574 aa19.56■□□□□ 0.72
USP4-208ENST00000464168 SLC43A1O75387 559 aa19.56■□□□□ 0.72
USP4-208ENST00000464168 CHN2P52757 468 aa19.56■□□□□ 0.72
USP4-208ENST00000464168 GTDC1Q4AE62 458 aa19.56■□□□□ 0.72
USP4-208ENST00000464168 MREGQ8N565 214 aa19.56■□□□□ 0.72
USP4-208ENST00000464168 HPS1Q92902 700 aa19.56■□□□□ 0.72
USP4-208ENST00000464168 ANKRD27Q96NW4 1050 aa19.56■□□□□ 0.72
USP4-208ENST00000464168 OXGR1Q96P68 337 aa19.56■□□□□ 0.72
USP4-208ENST00000464168 ARMC7Q9H6L4 198 aa19.56■□□□□ 0.72
USP4-208ENST00000464168 KCNK9Q9NPC2 374 aa19.56■□□□□ 0.72
USP4-208ENST00000464168 TMEFF2Q9UIK5 374 aaPredicted RBP19.56■□□□□ 0.72
USP4-208ENST00000464168 SH3PXD2BA1X283 911 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 HDAC3O15379 428 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 SLC22A3O75751 556 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 ERCC1P07992 297 aaPredicted RBP19.55■□□□□ 0.72
USP4-208ENST00000464168 APEX1P27695 318 aaKnown RBP19.55■□□□□ 0.72
USP4-208ENST00000464168 ARR3P36575 388 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 RIN1Q13671 783 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 CEACAM16Q2WEN9 425 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 PDCD4Q53EL6 469 aaKnown RBP19.55■□□□□ 0.72
USP4-208ENST00000464168 TNFAIP8L3Q5GJ75 292 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 WDR93Q6P2C0 686 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 CDK20Q8IZL9 346 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 RFLNBQ8N5W9 214 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 LINC01356Q8N9X3 169 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 VPS33AQ96AX1 596 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 SNX18Q96RF0 628 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 CRLF2Q9HC73 371 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 IFT52Q9Y366 437 aa19.55■□□□□ 0.72
USP4-208ENST00000464168 TRPC5OSA6NMA1 111 aa19.54■□□□□ 0.72
USP4-208ENST00000464168 ANP32DO95626 131 aa19.54■□□□□ 0.72
USP4-208ENST00000464168 IDO1P14902 403 aa19.54■□□□□ 0.72
USP4-208ENST00000464168 NPRL3Q12980 569 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms