RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 SLC30A8Q8IWU4 369 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 MUC15Q8N387 334 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 DPP10Q8N608 796 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 HIPK4Q8NE63 616 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 MAGEE2Q8TD90 523 aaPredicted RBP6.38□□□□□ -1.39
PTPRF-210ENST00000463041 BCL2L2Q92843 193 aaPredicted RBP6.38□□□□□ -1.39
PTPRF-210ENST00000463041 TAAR8Q969N4 342 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 KTI12Q96EK9 354 aaPredicted RBP6.38□□□□□ -1.39
PTPRF-210ENST00000463041 HS6ST2Q96MM7 605 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 ANKRD27Q96NW4 1050 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 SIKE1Q9BRV8 207 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 PTDSS2Q9BVG9 487 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 C1QTNF6Q9BXI9 259 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 RSPO3Q9BXY4 272 aaPredicted RBP6.38□□□□□ -1.39
PTPRF-210ENST00000463041 REG4Q9BYZ8 158 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 MOV10Q9HCE1 1003 aaKnown RBP6.38□□□□□ -1.39
PTPRF-210ENST00000463041 CBLN4Q9NTU7 201 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 MRGBPQ9NV56 204 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.38□□□□□ -1.39
PTPRF-210ENST00000463041 SLC13A4Q9UKG4 626 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 NDUFAF1Q9Y375 327 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 ATP23Q9Y6H3 246 aa6.38□□□□□ -1.39
PTPRF-210ENST00000463041 TRAV36DV7A0A075B6V5 113 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 A0A087WUJ7 227 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 VSTM5A8MXK1 200 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 MS4A18H0YCH9 400 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 RPL36A-HNRNPH2H7BZ11 118 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 M0QX08 132 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 FMO6PO60774 539 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 EDF1O60869 148 aaKnown RBP6.37□□□□□ -1.39
PTPRF-210ENST00000463041 ZNF432O94892 652 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 MFN2O95140 757 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 LGI1O95970 557 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 IGHV4-39P01824 125 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 H2AFXP16104 143 aaPredicted RBP6.37□□□□□ -1.39
PTPRF-210ENST00000463041 CDH2P19022 906 aaPredicted RBP6.37□□□□□ -1.39
PTPRF-210ENST00000463041 ACVR1BP36896 505 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 SELENOPP49908 381 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 SH3BGRP55822 239 aaPredicted RBP6.37□□□□□ -1.39
PTPRF-210ENST00000463041 CLDN17P56750 224 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 UBE2NP61088 152 aaKnown RBP6.37□□□□□ -1.39
PTPRF-210ENST00000463041 PPP2R2BQ00005 443 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 C1DQ13901 141 aaKnown RBP6.37□□□□□ -1.39
PTPRF-210ENST00000463041 VEZF1Q14119 521 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 OR1Q1Q15612 314 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 MS4A18Q3C1V0 323 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 GLIPR1L2Q4G1C9 344 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 C11orf71Q6IPW1 123 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 HMBOX1Q6NT76 420 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 NIPAL3Q6P499 406 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 ANKRD16Q6P6B7 361 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 DNM1P46Q6ZS02 220 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 ARMC8Q8IUR7 673 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 CCDC36Q8IYA8 594 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 C10orf111Q8N326 155 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 KDM8Q8N371 416 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 FAM169BQ8N8A8 192 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 C11orf65Q8NCR3 313 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 ADPRHL1Q8NDY3 354 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 OR1K1Q8NGR3 316 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 LRR1Q96L50 414 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 EPYCQ99645 322 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 CGREF1Q99674 301 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 CPPED1Q9BRF8 314 aaPredicted RBP6.37□□□□□ -1.39
PTPRF-210ENST00000463041 RHNO1Q9BSD3 238 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 PRR14Q9BWN1 585 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 IKZF5Q9H5V7 419 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 ZNF385DQ9H6B1 395 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 TESQ9UGI8 421 aaKnown RBP6.37□□□□□ -1.39
PTPRF-210ENST00000463041 RCE1Q9Y256 329 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 ANGPT4Q9Y264 503 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 CORINQ9Y5Q5 1042 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 PMF1-BGLAPU3KQ54 211 aa6.37□□□□□ -1.39
PTPRF-210ENST00000463041 ARPC4-TTLL3A0A0A6YYG9 625 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 RNF223E7ERA6 249 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 M0R082 166 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 ANGPT2O15123 496 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 AKAP8O43823 692 aaKnown RBP6.36□□□□□ -1.39
PTPRF-210ENST00000463041 SSX4O60224 188 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 TPST2O60704 377 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 NDUFS7O75251 213 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 SLC43A1O75387 559 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 UPK3AO75631 287 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 NPPAP01160 153 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 HTR2AP28223 471 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 GRPRP30550 384 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 PCBP3P57721 371 aaKnown RBP6.36□□□□□ -1.39
PTPRF-210ENST00000463041 RGS8P57771 180 aaPredicted RBP6.36□□□□□ -1.39
PTPRF-210ENST00000463041 NCALDP61601 193 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 SLC25A3Q00325 362 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 ROR2Q01974 943 aaKnown RBP6.36□□□□□ -1.39
PTPRF-210ENST00000463041 DMTNQ08495 405 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 CYLC2Q14093 348 aaPredicted RBP6.36□□□□□ -1.39
PTPRF-210ENST00000463041 DUSP7Q16829 419 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 TBRG1Q3YBR2 411 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 HIKESHIQ53FT3 197 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 SWT1Q5T5J6 900 aaKnown RBP6.36□□□□□ -1.39
PTPRF-210ENST00000463041 INTS11Q5TA45 600 aaKnown RBP6.36□□□□□ -1.39
PTPRF-210ENST00000463041 ZNF613Q6PF04 617 aa6.36□□□□□ -1.39
PTPRF-210ENST00000463041 LINC00114Q6XXX2 140 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms