RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 POU4F3Q15319 338 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 SLC36A3Q495N2 470 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 ALG10Q5BKT4 473 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 FAM205BPQ63HN1 556 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 TMEM225Q6GV28 225 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 GALNT5Q7Z7M9 940 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 DEPDC4Q8N2C3 294 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 LNX2Q8N448 690 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 LRRC17Q8N6Y2 441 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 SETD9Q8NE22 299 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 OR13C2Q8NGS9 318 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 ZNF417Q8TAU3 575 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 FANK1Q8TC84 345 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 SNRNP40Q96DI7 357 aaKnown RBP9.57□□□□□ -0.88
RTF1-202ENST00000462276 OXGR1Q96P68 337 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 UCN2Q96RP3 112 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 ZNF587Q96SQ5 575 aaPredicted RBP9.57□□□□□ -0.88
RTF1-202ENST00000462276 APOL4Q9BPW4 351 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 SLX1AQ9BQ83 275 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 TACO1Q9BSH4 297 aaKnown RBP9.57□□□□□ -0.88
RTF1-202ENST00000462276 ADI1Q9BV57 179 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 TSSK6Q9BXA6 273 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 RIBC2Q9H4K1 309 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 SLC25A19Q9HC21 320 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 MCCC2Q9HCC0 563 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 FAM118AQ9NWS6 357 aa9.57□□□□□ -0.88
RTF1-202ENST00000462276 NDRG4Q9ULP0 352 aaKnown RBP9.57□□□□□ -0.88
RTF1-202ENST00000462276 TRAV27A0A087WT01 109 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 A0A1B0GTH9 108 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 A0A1W2PRG6 482 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 TTLL8A6PVC2 850 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 E9PQ18 207 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 GPR171O14626 319 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 AHCYL1O43865 530 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 TXNDC12O95881 172 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 IFNGP01579 166 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 TP53P04637 393 aaPredicted RBP9.56□□□□□ -0.88
RTF1-202ENST00000462276 ADORA3P0DMS8 318 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 EDN3P14138 238 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 POU1F1P28069 291 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 PTGS2P35354 604 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 RPL4P36578 427 aaKnown RBP9.56□□□□□ -0.88
RTF1-202ENST00000462276 AQP2P41181 271 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 DAP3P51398 398 aaKnown RBP9.56□□□□□ -0.88
RTF1-202ENST00000462276 SUCLG1P53597 346 aaKnown RBP9.56□□□□□ -0.88
RTF1-202ENST00000462276 CDC42P60953 191 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 ADARB1P78563 741 aaKnown RBP9.56□□□□□ -0.88
RTF1-202ENST00000462276 RBPJQ06330 500 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 RPL18Q07020 188 aaKnown RBP9.56□□□□□ -0.88
RTF1-202ENST00000462276 FHL1Q13642 323 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 GINS1Q14691 196 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 RNPS1Q15287 305 aaKnown RBP9.56□□□□□ -0.88
RTF1-202ENST00000462276 SLX4IPQ5VYV7 408 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 UBQLNLQ8IYU4 475 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 SAMD8Q96LT4 415 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 SLC38A2Q96QD8 506 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 MBOAT4Q96T53 435 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 PITX2Q99697 317 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 RNF122Q9H9V4 155 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 CALHM2Q9HA72 323 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 NRIP3Q9NQ35 241 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 INIPQ9NRY2 104 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 GLRX2Q9NS18 164 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 TBC1D23Q9NUY8 699 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 TAS2R5Q9NYW4 299 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 SPRR3Q9UBC9 169 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 LIPGQ9Y5X9 500 aa9.56□□□□□ -0.88
RTF1-202ENST00000462276 A6NIZ1 184 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 FIGNL2A6NMB9 653 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 CENPBD1B2RD01 187 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 LRRN3E7EW58 273 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 ATXN7O15265 892 aaPredicted RBP9.55□□□□□ -0.88
RTF1-202ENST00000462276 RNF13O43567 381 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 DENRO43583 198 aaKnown RBP9.55□□□□□ -0.88
RTF1-202ENST00000462276 AKAP8O43823 692 aaKnown RBP9.55□□□□□ -0.88
RTF1-202ENST00000462276 CXCL13O43927 109 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 CYTIPO60759 359 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 WDR1O75083 606 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 AKR7A3O95154 331 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 SOX14O95416 240 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 IGHMP01871 453 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 OPN1LWP04000 364 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 ACADSP16219 412 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 ZNF43P17038 809 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 PTNP21246 168 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 AHCYP23526 432 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 NOS3P29474 1203 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 GRK5P34947 590 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 GGT2P36268 569 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 P2RY4P51582 365 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 SLC16A1P53985 500 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 RAP1BP61224 184 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 RAP1AP62834 184 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 SRYQ05066 204 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 C1DQ13901 141 aaKnown RBP9.55□□□□□ -0.88
RTF1-202ENST00000462276 ZIK1Q3SY52 487 aaPredicted RBP9.55□□□□□ -0.88
RTF1-202ENST00000462276 EEF1A1P5Q5VTE0 462 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 ANKRD34AQ69YU3 496 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 CASP12Q6UXS9 341 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 ADGRE4PQ86SQ3 457 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms