RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 PTAFRP25105 342 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 CD40P25942 277 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 GRPRP30550 384 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 CDKN1AP38936 164 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 CLDN17P56750 224 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 IL1RL1Q01638 556 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 LGALS3BPQ08380 585 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 SF3A3Q12874 501 aaKnown RBP eCLIP8.92□□□□□ -0.98
SF3A3-204ENST00000462258 MAPRE2Q15555 327 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 NRF1Q16656 503 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 PGGHGQ32M88 737 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 MMEL1Q495T6 779 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 HSP90B2PQ58FF3 399 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 COQ5Q5HYK3 327 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 SWT1Q5T5J6 900 aaKnown RBP8.92□□□□□ -0.98
SF3A3-204ENST00000462258 INTS11Q5TA45 600 aaKnown RBP8.92□□□□□ -0.98
SF3A3-204ENST00000462258 SLC22A25Q6T423 547 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 PATL1Q86TB9 770 aaKnown RBP8.92□□□□□ -0.98
SF3A3-204ENST00000462258 KDM8Q8N371 416 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 ADPRHL1Q8NDY3 354 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 GPR32P1Q8NGA4 272 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 OR10A6Q8NH74 314 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 VANGL1Q8TAA9 524 aaPredicted RBP8.92□□□□□ -0.98
SF3A3-204ENST00000462258 TAAR8Q969N4 342 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 GTPBP3Q969Y2 492 aaKnown RBP8.92□□□□□ -0.98
SF3A3-204ENST00000462258 TAMM41Q96BW9 452 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 RADILQ96JH8 1075 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 EPYCQ99645 322 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 SMR3AQ99954 134 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 WFDC6Q9BQY6 131 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 TRAF4Q9BUZ4 470 aaPredicted RBP8.92□□□□□ -0.98
SF3A3-204ENST00000462258 FAIMQ9NVQ4 179 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 CISD1Q9NZ45 108 aaKnown RBP8.92□□□□□ -0.98
SF3A3-204ENST00000462258 B3GAT1Q9P2W7 334 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 POU2F3Q9UKI9 436 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 MGAT4BQ9UQ53 548 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 RCE1Q9Y256 329 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 B3GALT5Q9Y2C3 310 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 M0QX08 132 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 OVOL3O00110 214 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 MRASO14807 208 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 TRAF3IP2O43734 574 aaPredicted RBP8.91□□□□□ -0.98
SF3A3-204ENST00000462258 CHP2O43745 196 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 AKAP8O43823 692 aaKnown RBP8.91□□□□□ -0.98
SF3A3-204ENST00000462258 FMO6PO60774 539 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 LGI1O95970 557 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 WNT11O96014 354 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 C8BP07358 591 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 NQO1P15559 274 aaKnown RBP8.91□□□□□ -0.98
SF3A3-204ENST00000462258 CD247P20963 164 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 CBLP22681 906 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 CDH12P55289 794 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 GUCY1A3Q02108 690 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 KLF10Q13118 480 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 C1DQ13901 141 aaKnown RBP8.91□□□□□ -0.98
SF3A3-204ENST00000462258 CYLC2Q14093 348 aaPredicted RBP8.91□□□□□ -0.98
SF3A3-204ENST00000462258 MFSD13AQ14CX5 517 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 NPTX1Q15818 432 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 DUSP7Q16829 419 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 VMACQ2NL98 169 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 TBRG1Q3YBR2 411 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 HIKESHIQ53FT3 197 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 RABL3Q5HYI8 236 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 C1QTNF12Q5T7M4 302 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 NANOGP8Q6NSW7 305 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF613Q6PF04 617 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 B3GLCTQ6Y288 498 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 LINGO2Q7L985 606 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 DTX2Q86UW9 622 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 SNX32Q86XE0 403 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 CIARTQ8N365 385 aaPredicted RBP8.91□□□□□ -0.98
SF3A3-204ENST00000462258 SCAIQ8N9R8 606 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 WDR31Q8NA23 367 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 OR8J3Q8NGG0 315 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 OR6T1Q8NGN1 323 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 OR1K1Q8NGR3 316 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 OR6S1Q8NH40 331 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 SLC26A7Q8TE54 656 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 TRMT61AQ96FX7 289 aaKnown RBP8.91□□□□□ -0.98
SF3A3-204ENST00000462258 OXGR1Q96P68 337 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 MCHR1Q99705 422 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 TMEM43Q9BTV4 400 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 BDH2Q9BUT1 245 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 C1QTNF6Q9BXI9 259 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 ASPNQ9BXN1 380 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 LINC00470Q9BZP3 86 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 CCDC134Q9H6E4 229 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 NANOGQ9H9S0 305 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 SAR1AQ9NR31 198 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 CORINQ9Y5Q5 1042 aa8.91□□□□□ -0.98
SF3A3-204ENST00000462258 HEATR1Q9H583 2144 aaKnown RBP8.9□□□□□ -0.98
SF3A3-204ENST00000462258 CPSF4LA6NMK7 179 aaKnown RBP8.9□□□□□ -0.98
SF3A3-204ENST00000462258 FAM171A2A8MVW0 826 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 LRRN3E7EW58 273 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 SMAD7O15105 426 aaKnown RBP8.9□□□□□ -0.98
SF3A3-204ENST00000462258 SLC43A1O75387 559 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 UPK3AO75631 287 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF432O94892 652 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 BGLAPP02818 100 aa8.9□□□□□ -0.98
SF3A3-204ENST00000462258 HEXAP06865 529 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms