RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 RNF115Q9Y4L5 304 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 M0R3H8 397 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 EIF1BO60739 113 aaKnown RBP12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 IGHV4-39P01824 125 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 CXCR1P25024 350 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 KDELR2P33947 212 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 OR3A2P47893 321 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 SLC7A2P52569 658 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 RGS8P57771 180 aaPredicted RBP12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 SLC35A1P78382 337 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 VLDLRP98155 873 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 RASGEF1BQ0VAM2 473 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 BNIP2Q12982 314 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 SLC17A1Q14916 467 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 OR1Q1Q15612 314 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 C1orf140Q5VVS0 124 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 ANKRD34AQ69YU3 496 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 ZNF613Q6PF04 617 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 ULK3Q6PHR2 472 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 NHLRC1Q6VVB1 395 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 RBM45Q8IUH3 476 aaKnown RBP12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 MICU2Q8IYU8 434 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 ZIC4Q8N9L1 334 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 OR2T12Q8NG77 320 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 OR52E4Q8NGH9 312 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 OR6S1Q8NH40 331 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 MFSD8Q8NHS3 518 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 RASSF5Q8WWW0 418 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 ZNF300Q96RE9 604 aaPredicted RBP12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 PRRG4Q9BZD6 226 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 ACTR6Q9GZN1 396 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 PIF1Q9H611 641 aa12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 CACYBPQ9HB71 228 aaKnown RBP12.03□□□□□ -0.48
SCAMP4-206ENST00000460767 ELOVL7A1L3X0 281 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 AQP7P3A6NL99 342 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 PDLIM1O00151 329 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 WIPF1O43516 503 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 PNMTP11086 282 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 GSK3BP49841 420 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 LIPEQ05469 1076 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 LOXL1Q08397 574 aaPredicted RBP12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 TMEM249Q2WGJ8 235 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 ALG10BQ5I7T1 473 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 NCMAPQ5T1S8 102 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 C5orf46Q6UWT4 87 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 WDR88Q6ZMY6 472 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 BEND4Q6ZU67 534 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 DTX2Q86UW9 622 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 CCDC103Q8IW40 242 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 FITM2Q8N6M3 262 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 PIGXQ8TBF5 258 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 SMAP2Q8WU79 429 aaPredicted RBP12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 KTI12Q96EK9 354 aaPredicted RBP12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 SLC41A3Q96GZ6 507 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 LRRC37BQ96QE4 947 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 PRSS27Q9BQR3 290 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 TMEM43Q9BTV4 400 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 SF3B5Q9BWJ5 86 aaKnown RBP12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 B3GAT1Q9P2W7 334 aa12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 MAGED1Q9Y5V3 778 aaPredicted RBP12.02□□□□□ -0.49
SCAMP4-206ENST00000460767 LOC102725191A0A1B0GVB3 256 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 CHP2O43745 196 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 DCTN3O75935 186 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 PLGP00747 810 aaPredicted RBP12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 GPIP06744 558 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 TFPIP10646 304 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 CCNA2P20248 432 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 COX5AP20674 150 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 CDKN1AP38936 164 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 NUDT2P50583 147 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 CDH12P55289 794 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 CTBP2P56545 445 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 PSME3P61289 254 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 CEACAM7Q14002 265 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 KRT72Q14CN4 511 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 ZNF672Q499Z4 452 aaPredicted RBP12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 CYBRD1Q53TN4 286 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 TMEM201Q5SNT2 666 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 SEZ6L2Q6UXD5 910 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 WFDC8Q8IUA0 241 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 TMEM99Q8N816 258 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 OR10H5Q8NGA6 315 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 ADAMTS16Q8TE57 1224 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 TAAR8Q969N4 342 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 TMEM45BQ96B21 275 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 SLC47A1Q96FL8 570 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 TRAF4Q9BUZ4 470 aaPredicted RBP12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 ALG2Q9H553 416 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 ARL8BQ9NVJ2 186 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 MALT1Q9UDY8 824 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 CD300AQ9UGN4 299 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 FLVCR1Q9Y5Y0 555 aa12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 YLPM1P49750 1951 aaKnown RBP12.01□□□□□ -0.49
SCAMP4-206ENST00000460767 ELOA3DA6NLF2 546 aaPredicted RBP12□□□□□ -0.49
SCAMP4-206ENST00000460767 NDUFAB1O14561 156 aa12□□□□□ -0.49
SCAMP4-206ENST00000460767 OR2B6P58173 313 aa12□□□□□ -0.49
SCAMP4-206ENST00000460767 DSCR9P59020 149 aa12□□□□□ -0.49
SCAMP4-206ENST00000460767 SELENOWP63302 87 aa12□□□□□ -0.49
SCAMP4-206ENST00000460767 EXOC3L2Q2M3D2 409 aa12□□□□□ -0.49
SCAMP4-206ENST00000460767 PGGHGQ32M88 737 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms