RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 GNG2P59768 71 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 RACK1P63244 317 aaKnown RBP10.69□□□□□ -0.7
NPHP4-204ENST00000460696 ATXN7L3Q14CW9 347 aaPredicted RBP10.69□□□□□ -0.7
NPHP4-204ENST00000460696 SLC22A10Q63ZE4 541 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 TMEM156Q8N614 296 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 OR6N1Q8NGY5 312 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 OR4C3Q8NH37 302 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 GPR148Q8TDV2 347 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 DUSP19Q8WTR2 217 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 C15orf40Q8WUR7 153 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 SNAPC3Q92966 411 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 ZNF350Q9GZX5 532 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 FAM60AQ9NP50 221 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 EPHA6Q9UF33 1036 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 CHD8Q9HCK8 2581 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 B4DXG7 233 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 GABRB1P18505 474 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 EVX1P49640 407 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 OLFML2AQ68BL7 652 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 ZNF770Q6IQ21 691 aaPredicted RBP10.69□□□□□ -0.7
NPHP4-204ENST00000460696 OR5J2Q8NH18 312 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 NXPE2Q96DL1 559 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 VWCEQ96DN2 955 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 TRMT61AQ96FX7 289 aaKnown RBP10.69□□□□□ -0.7
NPHP4-204ENST00000460696 DEFB126Q9BYW3 111 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 BARHL1Q9BZE3 327 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 ZNF281Q9Y2X9 895 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 CENPVL1A0A0U1RR11 272 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 KDM4EB2RXH2 506 aaPredicted RBP10.68□□□□□ -0.7
NPHP4-204ENST00000460696 PATE3B3GLJ2 98 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 ARPC1BO15143 372 aaKnown RBP10.68□□□□□ -0.7
NPHP4-204ENST00000460696 HCRTR1O43613 425 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 BRINP1O60477 761 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 UTS2O95399 124 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 IFNA7P01567 189 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 ETV6P41212 452 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 CCR6P51684 374 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 LRRC37A5PQ49AS3 106 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 MANEAQ5SRI9 462 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 SLC18B1Q6NT16 456 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 NAXEQ8NCW5 288 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 KCTD12Q96CX2 325 aaKnown RBP10.68□□□□□ -0.7
NPHP4-204ENST00000460696 PSD2Q9BQI7 771 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 PPP4R1LQ9P1A2 415 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 UPB1Q9UBR1 384 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 A0A087WV62 115 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 METTL21EPA6NDL7 271 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 TNFRSF10AO00220 468 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 CD14P08571 375 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 FRKP42685 505 aaPredicted RBP10.68□□□□□ -0.7
NPHP4-204ENST00000460696 PTH2RP49190 550 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 NOVA1P51513 510 aaKnown RBP10.68□□□□□ -0.7
NPHP4-204ENST00000460696 GALK2Q01415 458 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 ASAH1Q13510 395 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 IRF3Q14653 427 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 VWA2Q5GFL6 755 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 ARMC10Q8N2F6 343 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 NT5CQ8TCD5 201 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 LPAR4Q99677 370 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 RANBP3Q9H6Z4 567 aaPredicted RBP10.68□□□□□ -0.7
NPHP4-204ENST00000460696 ABRACLQ9P1F3 81 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 EFCAB7A8K855 629 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 C4orf51C9J302 202 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 M0R233 179 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 ECDO95905 644 aaPredicted RBP10.68□□□□□ -0.7
NPHP4-204ENST00000460696 OC90Q02509 493 aaPredicted RBP10.68□□□□□ -0.7
NPHP4-204ENST00000460696 PCGF3Q3KNV8 242 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 LRRN1Q6UXK5 716 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 FTMTQ8N4E7 242 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 CASTOR1Q8WTX7 329 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 TMEM106AQ96A25 262 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 TMEM41AQ96HV5 264 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 ULBP3Q9BZM4 244 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 ELOVL3Q9HB03 270 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 INIPQ9NRY2 104 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 MAN2C1Q9NTJ4 1040 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 TBC1D24Q9ULP9 559 aa10.68□□□□□ -0.7
NPHP4-204ENST00000460696 NOP16Q9Y3C1 178 aaKnown RBP10.68□□□□□ -0.7
NPHP4-204ENST00000460696 IGHV3-20A0A0C4DH32 117 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 OR1D5P58170 312 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 ZXDAP98168 799 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 TLE3Q04726 772 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 FCN2Q15485 313 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 AADACL4Q5VUY2 407 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 FCRL6Q6DN72 434 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 VASNQ6EMK4 673 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 DPY19L2P2Q6ZN68 376 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 SIAH3Q8IW03 269 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 SLC35F3Q8IY50 421 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 BCORP1Q8N888 145 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 LRRC20Q8TCA0 184 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 BRIX1Q8TDN6 353 aaKnown RBP10.67□□□□□ -0.7
NPHP4-204ENST00000460696 TSLPQ969D9 159 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 ZNF681Q96N22 645 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 ACTR6Q9GZN1 396 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 FKBP14Q9NWM8 211 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 COPZ2Q9P299 210 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 VSTM2BA6NLU5 285 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 SDHBP21912 280 aa10.67□□□□□ -0.7
NPHP4-204ENST00000460696 SFTPDP35247 375 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms