RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 IL17RCQ8NAC3 791 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 OR4M1Q8NGD0 313 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 NAT6Q93015 286 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 CHRDQ9H2X0 955 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 METTL17Q9H7H0 456 aaPredicted RBP13.64□□□□□ -0.23
PTPRU-205ENST00000460170 NTNG1Q9Y2I2 539 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 BCAT2O15382 392 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-205ENST00000460170 FGF17O60258 216 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 CPEP16870 476 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 ZNF28P17035 718 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 PTBP1P26599 531 aaKnown RBP eCLIP13.63□□□□□ -0.23
PTPRU-205ENST00000460170 SSTR2P30874 369 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 FOLR3P41439 243 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 DUSP8Q13202 625 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 SLC35D3Q5M8T2 416 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 OR7G1Q8NGA0 311 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 SORCS2Q96PQ0 1159 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 ST6GALNAC5Q9BVH7 336 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 TCRBP04435 133 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 CD22P20273 847 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 PTPN6P29350 595 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 IL13RA1P78552 427 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 RPL19P84098 196 aaKnown RBP13.63□□□□□ -0.23
PTPRU-205ENST00000460170 SLC22A6Q4U2R8 563 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 YIF1BQ5BJH7 314 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 FAM160A2Q8N612 972 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-205ENST00000460170 Q96M85 177 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 KLF15Q9UIH9 416 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 DLSTP36957 453 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 GALEQ14376 348 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 CD163Q86VB7 1156 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 MISPQ8IVT2 679 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 TOMM40LQ969M1 308 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 ZBTB8AQ96BR9 441 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 FGF21Q9NSA1 209 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 PLEKHJ1Q9NW61 149 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 TRIP11Q15643 1979 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 TMED7-TICAM2A0A0A6YYA0 188 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 P2RX6O15547 441 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 GLCEO94923 617 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 SLC26A5P58743 744 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 ABHD17BQ5VST6 288 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 BPIFB2Q8N4F0 458 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 GOT1L1Q8NHS2 421 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-205ENST00000460170 SCGB1C1Q8TD33 95 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 DCUN1D4Q92564 292 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 RASD2Q96D21 266 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 NUDT22Q9BRQ3 303 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 PRDM9Q9NQV7 894 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 CMC2Q9NRP2 79 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 VSX1Q9NZR4 365 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-205ENST00000460170 TMED7Q9Y3B3 224 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 RHBDD3Q9Y3P4 386 aa13.63□□□□□ -0.23
PTPRU-205ENST00000460170 FTCDNL1E5RQL4 147 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 CDK2P24941 298 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 RIN1Q13671 783 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 ALKBH1Q13686 389 aaKnown RBP13.62□□□□□ -0.23
PTPRU-205ENST00000460170 RBMS2Q15434 407 aaKnown RBP13.62□□□□□ -0.23
PTPRU-205ENST00000460170 VASH1Q7L8A9 365 aaPredicted RBP13.62□□□□□ -0.23
PTPRU-205ENST00000460170 SIAH3Q8IW03 269 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 IL17RDQ8NFM7 739 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 OPALINQ96PE5 141 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 FAM86C1Q9NVL1 165 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 NCDNQ9UBB6 729 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 KCNS2Q9ULS6 477 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 TMX2-CTNND1H3BSU7 103 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 SRYQ05066 204 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 POU4F3Q15319 338 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 OPN5Q6U736 354 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 RSC1A1Q92681 617 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 CNRIP1Q96F85 164 aaPredicted RBP13.62□□□□□ -0.23
PTPRU-205ENST00000460170 SLC6A18Q96N87 628 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 SLC25A19Q9HC21 320 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 ADAM23O75077 832 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 LIPCP11150 499 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 NPR2P20594 1047 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 RGS19P49795 217 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 WNT3P56703 355 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 LILRA6Q6PI73 481 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 BEND4Q6ZU67 534 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 SGPP2Q8IWX5 399 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 ZNF454Q8N9F8 522 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 ACBD4Q8NC06 268 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 NLGN4YQ8NFZ3 816 aaPredicted RBP13.62□□□□□ -0.23
PTPRU-205ENST00000460170 PATE1Q8WXA2 126 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 OR10A2Q9H208 303 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 ZFP57Q9NU63 452 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 UPK1AO00322 258 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 CEACAM5P06731 702 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 ZNF616Q08AN1 781 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 ANKRD53Q8N9V6 530 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 VRK1Q99986 396 aaPredicted RBP13.62□□□□□ -0.23
PTPRU-205ENST00000460170 TEX101Q9BY14 249 aa13.62□□□□□ -0.23
PTPRU-205ENST00000460170 YARS2Q9Y2Z4 477 aaKnown RBP13.62□□□□□ -0.23
PTPRU-205ENST00000460170 FER1L6Q2WGJ9 1857 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 KCNE1BA0A087WTH5 132 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 PPA1Q15181 289 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 CTF1Q16619 201 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 TMEM99Q8N816 258 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 FRMD1Q8N878 549 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms