RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TLE4Q04727 773 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 SCRN3Q0VDG4 424 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 SSX2Q16385 188 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 OTPQ5XKR4 325 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
CCDC50-203ENST00000460064 FNDC5Q8NAU1 212 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 DRAXINQ8NBI3 349 aaPredicted RBP3.86□□□□□ -1.79
CCDC50-203ENST00000460064 OR10G3Q8NGC4 313 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 OR9K2Q8NGE7 335 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 OR51S1Q8NGJ8 323 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 AKR7LQ8NHP1 331 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 PANX2Q96RD6 677 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 P2RY13Q9BPV8 354 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 RIOK1Q9BRS2 568 aaKnown RBP3.86□□□□□ -1.79
CCDC50-203ENST00000460064 SLC7A5P2Q9GIP4 190 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 ANKRD19PQ9H560 264 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 NIPAL2Q9H841 368 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 PDFQ9HBH1 243 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 DDX18Q9NVP1 670 aaKnown RBP3.86□□□□□ -1.79
CCDC50-203ENST00000460064 KCNIP1Q9NZI2 227 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 SLC7A8Q9UHI5 535 aa3.86□□□□□ -1.79
CCDC50-203ENST00000460064 ARPC4-TTLL3A0A0A6YYG9 625 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 A0A0U1RQS6 177 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 HPNP05981 417 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 ABOP16442 354 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 FUT3P21217 361 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 CASP14P31944 242 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 CAV2P51636 162 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 PRPS1P60891 318 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 GK3PQ14409 553 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 NSDHLQ15738 373 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 C1orf100Q5SVJ3 147 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 PLA2G4DQ86XP0 818 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 CDH26Q8IXH8 852 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 TPRX1Q8N7U7 411 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 CCDC148Q8NFR7 591 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 OR1L6Q8NGR2 347 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 UCN3Q969E3 161 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 RPUSD4Q96CM3 377 aaKnown RBP3.85□□□□□ -1.79
CCDC50-203ENST00000460064 TM4SF19Q96DZ7 209 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 C20orf85Q9H1P6 137 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 SLC25A22Q9H936 323 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 PLGRKTQ9HBL7 147 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 TM9SF3Q9HD45 589 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 GIN1Q9NXP7 522 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 ZNF256Q9Y2P7 627 aaPredicted RBP3.85□□□□□ -1.79
CCDC50-203ENST00000460064 NOTCH3Q9UM47 2321 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 NSD2O96028 1365 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.85□□□□□ -1.79
CCDC50-203ENST00000460064 ARHGAP23Q9P227 1491 aa3.85□□□□□ -1.79
CCDC50-203ENST00000460064 PPIAL4EA0A075B759 164 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 FAM47DPA6NHR8 397 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 USP27XA6NNY8 438 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 A8MUA0 341 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 MMP1P03956 469 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 GAPDHP04406 335 aaKnown RBP3.84□□□□□ -1.79
CCDC50-203ENST00000460064 PPIAL4FP0DN26 164 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 TBPP20226 339 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 VDAC2P45880 294 aaPredicted RBP3.84□□□□□ -1.79
CCDC50-203ENST00000460064 ZNF763Q0D2J5 394 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 CUL2Q13617 745 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 GNMTQ14749 295 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 PPP1R7Q15435 360 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 ATP6AP1Q15904 470 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 IL17AQ16552 155 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 CCDC14Q49A88 953 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 PAGE3Q5JUK9 113 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 PRSS41Q7RTY9 318 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 NKAPP1Q8N9T2 125 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 SDR9C7Q8NEX9 313 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 OR6C4Q8NGE1 309 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 PYROXD1Q8WU10 500 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 FAM151AQ8WW52 585 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 FRAT1Q92837 279 aaPredicted RBP3.84□□□□□ -1.79
CCDC50-203ENST00000460064 ITCHQ96J02 903 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 PLEKHA8Q96JA3 519 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 C12orf42Q96LP6 360 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 IMMP1LQ96LU5 166 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 ZIM3Q96PE6 472 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 GBA3Q9H227 469 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 SLC2A8Q9NY64 477 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 ADAM22Q9P0K1 906 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 MMP17Q9ULZ9 603 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 CAB39Q9Y376 341 aaPredicted RBP3.84□□□□□ -1.79
CCDC50-203ENST00000460064 TMED5Q9Y3A6 229 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 CDH10Q9Y6N8 788 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 PLEKHG1Q9ULL1 1385 aa3.84□□□□□ -1.79
CCDC50-203ENST00000460064 A0A1B0GVY2 172 aa3.83□□□□□ -1.8
CCDC50-203ENST00000460064 CCDC182A6NF36 153 aa3.83□□□□□ -1.8
CCDC50-203ENST00000460064 AGPAT2O15120 278 aa3.83□□□□□ -1.8
CCDC50-203ENST00000460064 CIB2O75838 187 aa3.83□□□□□ -1.8
CCDC50-203ENST00000460064 NDUFB10O96000 172 aa3.83□□□□□ -1.8
CCDC50-203ENST00000460064 PAHP00439 452 aa3.83□□□□□ -1.8
CCDC50-203ENST00000460064 UBTFL1P0CB47 393 aaPredicted RBP3.83□□□□□ -1.8
CCDC50-203ENST00000460064 MCF2P10911 925 aa3.83□□□□□ -1.8
CCDC50-203ENST00000460064 CD9P21926 228 aa3.83□□□□□ -1.8
CCDC50-203ENST00000460064 SLC2A5P22732 501 aa3.83□□□□□ -1.8
CCDC50-203ENST00000460064 GDI1P31150 447 aa3.83□□□□□ -1.8
CCDC50-203ENST00000460064 FMO3P31513 532 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms