RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 AQP5P55064 265 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 CLDN17P56750 224 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 LGALS3BPQ08380 585 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 C1DQ13901 141 aaKnown RBP13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 TBRG1Q3YBR2 411 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 IL17RELQ6ZVW7 336 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 KDM8Q8N371 416 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 OR1K1Q8NGR3 316 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 MFSD8Q8NHS3 518 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 SLC35B4Q969S0 331 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 FBXO17Q96EF6 278 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 OBP2BQ9NPH6 170 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 SLC25A37Q9NYZ2 338 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 MOKQ9UQ07 419 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 PMF1-BGLAPU3KQ54 211 aa13.76□□□□□ -0.21
CHCHD3-204ENST00000457942 A0A096LPE4 126 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 A0A1W2PPZ6 126 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 AIM2O14862 343 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 NPIPB7O75200 414 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 ARAFP10398 606 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 BMP2P12643 396 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 APOBEC3AP31941 199 aaPredicted RBP13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 P2RY4P51582 365 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 RGS8P57771 180 aaPredicted RBP13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 DSCR9P59020 149 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 TUBA1BP68363 451 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 TUBA4AP68366 448 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 CDK6Q00534 326 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 AGKQ53H12 422 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 ALG10BQ5I7T1 473 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 LRIF1Q5T3J3 769 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 C1QTNF12Q5T7M4 302 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 REEP3Q6NUK4 255 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 BLOC1S3Q6QNY0 202 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 TUBA1AQ71U36 451 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 EPHX4Q8IUS5 362 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 ZNF525Q8N782 197 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 SLC38A4Q969I6 547 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 KTI12Q96EK9 354 aaPredicted RBP13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 THOC1Q96FV9 657 aaKnown RBP13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 SLC38A2Q96QD8 506 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 CCDC28BQ9BUN5 200 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 SLAMF8Q9P0V8 285 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 CDC42EP3Q9UKI2 254 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 CORO2BQ9UQ03 480 aa13.75□□□□□ -0.21
CHCHD3-204ENST00000457942 A0A1B0GWA3 101 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 EVPLLA8MZ36 301 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 H7C417 338 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 AKAP8O43823 692 aaKnown RBP13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 SLC43A1O75387 559 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 UPK3AO75631 287 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 ZNF16P17020 682 aaPredicted RBP13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 HOXB9P17482 250 aaPredicted RBP13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 CBLP22681 906 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 SLC6A2P23975 617 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 AQP1P29972 269 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 MRPL19P49406 292 aaKnown RBP13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 SNRPD2P62316 118 aaKnown RBP13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 ROR2Q01974 943 aaKnown RBP13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 SCARB2Q14108 478 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 SQLEQ14534 574 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 PAGE3Q5JUK9 113 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 DNM1P46Q6ZS02 220 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 FUNDC1Q8IVP5 155 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 MSRB3Q8IXL7 192 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 GPR137CQ8N3F9 429 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 DNAJA4Q8WW22 397 aaPredicted RBP13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 FAM168AQ92567 244 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 ZNF607Q96SK3 696 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 KCNK17Q96T54 332 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 PTDSS2Q9BVG9 487 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 BEX2Q9BXY8 128 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 VAPAQ9P0L0 249 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 SEC14L4Q9UDX3 406 aa13.74□□□□□ -0.21
CHCHD3-204ENST00000457942 IGHV1-18A0A0C4DH31 117 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 FTCDNL1E5RQL4 147 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 M0R082 166 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 WIPF1O43516 503 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 OR2T1O43869 369 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 CRYAAP02489 173 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 NQO1P15559 274 aaKnown RBP13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 HTR2AP28223 471 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 GRPRP30550 384 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 CAPZA2P47755 286 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 SH3BGRP55822 239 aaPredicted RBP13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 EGR4Q05215 589 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 FAM69AQ5T7M9 428 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 ANKRD16Q6P6B7 361 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 DHRS4L2Q6PKH6 230 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 VHLLQ6RSH7 139 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 C5orf46Q6UWT4 87 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 ARIH2OSQ8N7S6 290 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 ZNF417Q8TAU3 575 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 TAAR8Q969N4 342 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 OXGR1Q96P68 337 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 ZNF587Q96SQ5 575 aaPredicted RBP13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 C12orf10Q9HB07 376 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 TMEM27Q9HBJ8 222 aa13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 TESQ9UGI8 421 aaKnown RBP13.73□□□□□ -0.21
CHCHD3-204ENST00000457942 RCE1Q9Y256 329 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms