RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ZNF764Q96H86 408 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM59Q9BXS4 323 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 FBXW2Q9UKT8 454 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 MCTS1Q9ULC4 181 aaKnown RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 FRMPD3Q5JV73 1810 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 H7BYZ3 331 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 IL5P05113 134 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ACSM4P0C7M7 580 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 OR5H8P0DN80 308 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 PMCHP20382 165 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 CSN1S1P47710 185 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 NPY4RP50391 375 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 RPS23P62266 143 aaKnown RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 GPLD1P80108 840 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 C22orf39Q6P5X5 142 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 PRICKLE2Q7Z3G6 844 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 TECPR1Q7Z6L1 1165 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ADGRG5Q8IZF4 528 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 EIF4E3Q8N5X7 224 aaKnown RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 SIGLECL1Q8N7X8 197 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 OR5H6Q8NGV6 325 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 WDFY2Q96P53 400 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 WWTR1Q9GZV5 400 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 NDRG4Q9ULP0 352 aaKnown RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 RNASEK-C17orf49H0YIS7 233 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 CD14P08571 375 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 DUSP1P28562 367 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 RABIFP47224 123 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 PDE7AQ13946 482 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 CRMP1Q14194 572 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ADIRFQ15847 76 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 SIRPB2Q5JXA9 342 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 CORO6Q6QEF8 472 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 GALNT16Q8N428 558 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 CMTM2Q8TAZ6 248 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 C16orf78Q8WTQ4 265 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 THEM6Q8WUY1 208 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ZNRF4Q8WWF5 429 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 YIPF5Q969M3 257 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 DUSP23Q9BVJ7 150 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 TM6SF2Q9BZW4 377 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 CDH20Q9HBT6 801 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF331Q9NQX6 463 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 DNAJC27Q9NZQ0 273 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 KCND3Q9UK17 655 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM184BQ9Y519 407 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 EPHX1P07099 455 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 BMPR1AP36894 532 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM225Q6GV28 225 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 RNF111Q6ZNA4 994 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 DGAT2L6Q6ZPD8 337 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 CATSPERDQ86XM0 798 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 SCMH1Q96GD3 660 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ABHD14BQ96IU4 210 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 EDEM2Q9BV94 578 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 TEX101Q9BY14 249 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 SLC6A20Q9NP91 592 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 FLVCR2Q9UPI3 526 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 NEDD8-MDP1E9PL57 170 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 DVL2O14641 736 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 GCAP28676 217 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 FGF9P31371 208 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 SLC5A2P31639 672 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 HTR5AP47898 357 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 TPPP2P59282 170 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF154Q13106 437 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 IL10RAQ13651 578 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 OR8G1Q15617 311 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 REC114Q7Z4M0 266 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 RELL2Q8NC24 303 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 OR5B2Q96R09 309 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 GAL3ST4Q96RP7 486 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 FLG2Q5D862 2391 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 A0A1W2PQ09 198 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 FZD7O75084 574 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 KDM4DQ6B0I6 523 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 DTWD1Q8N5C7 304 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 TCTEX1D1Q8N7M0 179 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 LRRN4CLQ8ND94 238 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 CSNK2A3Q8NEV1 391 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 FRZBQ92765 325 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 PLEKHF2Q9H8W4 249 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 A8MUI8 341 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 DCAF12L1Q5VU92 463 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 HSD17B13Q7Z5P4 300 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 BOLLQ8N9W6 283 aaKnown RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 DNAJB11Q9UBS4 358 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 INSL6Q9Y581 213 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ARHGAP21Q5T5U3 1957 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 KDM4FA0A1W2PPD8 638 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 PDHXO00330 501 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 GOSR2O14653 212 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 FNTBP49356 437 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 LINC01559Q495D7 138 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 FRMPD2BQ6IN97 320 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 DCXRQ7Z4W1 244 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 FRMD1Q8N878 549 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ANAPC16Q96DE5 110 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 METTL7AQ9H8H3 244 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms