RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 NTHL1P78549 312 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 LTBQ06643 244 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 STPG1Q5TH74 334 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 UQCC3Q6UW78 93 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 ADAMTSL4Q6UY14 1074 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 TMEM185AQ8NFB2 350 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 OR4K14Q8NGD5 310 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 OR2L8Q8NGY9 312 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 CCDC107Q8WV48 283 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 OR8D1Q8WZ84 308 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 HSPA12BQ96MM6 686 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 LGR4Q9BXB1 951 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 PIGMQ9H3S5 423 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 SLC39A1Q9NY26 324 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 UPB1Q9UBR1 384 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 CHRNA9Q9UGM1 479 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 APOBEC3BQ9UH17 382 aaKnown RBP12.57□□□□□ -0.4
PTPRE-204ENST00000455661 ABT1Q9ULW3 272 aaKnown RBP12.57□□□□□ -0.4
PTPRE-204ENST00000455661 IER3IP1Q9Y5U9 82 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 NPIPA5A0A0B4J1W7 369 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 DISC1C4P0D8 188 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 NPIPA7E9PJI5 369 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 PEX12O00623 359 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 ATG12O94817 140 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 ZFPL1O95159 310 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 NDUFB2O95178 105 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 PCCBP05166 539 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 NPIPA8P0DM63 369 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 GTF2F2P13984 249 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 CCR2P41597 374 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 IRF4Q15306 451 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 TMEM52BQ4KMG9 183 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 FAM74A1Q5RGS3 127 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 HAGHLQ6PII5 290 aaPredicted RBP12.57□□□□□ -0.4
PTPRE-204ENST00000455661 COX18Q8N8Q8 333 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 INSM2Q96T92 566 aaPredicted RBP12.57□□□□□ -0.4
PTPRE-204ENST00000455661 TSNAXQ99598 290 aaKnown RBP12.57□□□□□ -0.4
PTPRE-204ENST00000455661 CDV3Q9UKY7 258 aaKnown RBP12.57□□□□□ -0.4
PTPRE-204ENST00000455661 WNT6Q9Y6F9 365 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 CCL16O15467 120 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 ANXA2P07355 339 aaKnown RBP12.56□□□□□ -0.4
PTPRE-204ENST00000455661 TACSTD2P09758 323 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 AK4P27144 223 aaPredicted RBP12.56□□□□□ -0.4
PTPRE-204ENST00000455661 Q499Y3 187 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 SLC35D3Q5M8T2 416 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 RAB11FIP2Q7L804 512 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 DEFB128Q7Z7B8 93 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 TMPRSS12Q86WS5 348 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 ZNF227Q86WZ6 799 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 BEST3Q8N1M1 668 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 MFSD9Q8NBP5 474 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 OR51S1Q8NGJ8 323 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 OR6K6Q8NGW6 343 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 RPS4Y2Q8TD47 263 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 TMEM185BQ9H7F4 350 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 BARX1Q9HBU1 254 aaPredicted RBP12.56□□□□□ -0.4
PTPRE-204ENST00000455661 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 TMEM272A0A1B0GTI8 110 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 IDSB3KWA1 339 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 EIF4E2O60573 245 aaKnown RBP12.56□□□□□ -0.4
PTPRE-204ENST00000455661 ZNF254O75437 659 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 PMS2P2O95744 297 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 PAK4O96013 591 aaPredicted RBP12.56□□□□□ -0.4
PTPRE-204ENST00000455661 TMIGD3P0DMS9 266 aaPredicted RBP12.56□□□□□ -0.4
PTPRE-204ENST00000455661 ADH7P40394 386 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 RBM34P42696 430 aaKnown RBP12.56□□□□□ -0.4
PTPRE-204ENST00000455661 PSMD4P55036 377 aaKnown RBP12.56□□□□□ -0.4
PTPRE-204ENST00000455661 SCAND1P57086 179 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 CDK3Q00526 305 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 TEAD2Q15562 447 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 SLC6A19Q695T7 634 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 SVBPQ8N300 66 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 C10orf90Q96M02 699 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 ALX4Q9H161 411 aaPredicted RBP12.56□□□□□ -0.4
PTPRE-204ENST00000455661 SYNPO2LQ9H987 977 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 ADAP2Q9NPF8 381 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 HCFC1R1Q9NWW0 138 aa12.56□□□□□ -0.4
PTPRE-204ENST00000455661 GPN3Q9UHW5 284 aaPredicted RBP12.56□□□□□ -0.4
PTPRE-204ENST00000455661 TRAV14DV4A0A0A6YYC5 116 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 A0A0B4J2E0 115 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 A0A1B0GX12 115 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 OR14I1A6ND48 311 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 H0YC42 278 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 PSMD9O00233 223 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 GP1BAP07359 652 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 DDX6P26196 483 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTPRE-204ENST00000455661 RPL4P36578 427 aaKnown RBP12.55□□□□□ -0.4
PTPRE-204ENST00000455661 NANOS3P60323 173 aaKnown RBP12.55□□□□□ -0.4
PTPRE-204ENST00000455661 SREBF2Q12772 1141 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 MLF2Q15773 248 aaPredicted RBP12.55□□□□□ -0.4
PTPRE-204ENST00000455661 FNDC3BQ53EP0 1204 aaKnown RBP12.55□□□□□ -0.4
PTPRE-204ENST00000455661 FAM220AQ7Z4H9 259 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 KCNRGQ8N5I3 272 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 C12orf45Q8N5I9 185 aaPredicted RBP12.55□□□□□ -0.4
PTPRE-204ENST00000455661 OR4D10Q8NGI6 311 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 OR5AK2Q8NH90 309 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 WFIKKN2Q8TEU8 576 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 DUSP19Q8WTR2 217 aa12.55□□□□□ -0.4
PTPRE-204ENST00000455661 RGP1Q92546 391 aaPredicted RBP12.55□□□□□ -0.4
PTPRE-204ENST00000455661 PHYHIPLQ96FC7 376 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms