RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SLC25A36Q96CQ1 311 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 ZNF845Q96IR2 970 aaPredicted RBP10.06□□□□□ -0.8
TRAF4-206ENST00000454852 TUBA1CQ9BQE3 449 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 NDEL1Q9GZM8 345 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 OR52D1Q9H346 318 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 CALHM2Q9HA72 323 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 SMPD3Q9NY59 655 aaPredicted RBP10.06□□□□□ -0.8
TRAF4-206ENST00000454852 B3GAT1Q9P2W7 334 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 CLCF1Q9UBD9 225 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 MCTS1Q9ULC4 181 aaKnown RBP10.06□□□□□ -0.8
TRAF4-206ENST00000454852 ORC6Q9Y5N6 252 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 IGSF10Q6WRI0 2623 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 TRAV27A0A087WT01 109 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 FIGNL2A6NMB9 653 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 ZNF716A6NP11 495 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 CLCA1A8K7I4 914 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 ZNF814B7Z6K7 855 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 IMPA2O14732 288 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 ARPC3O15145 178 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 SLC16A6O15403 523 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 AKR7A3O95154 331 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 TXNDC12O95881 172 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 FCGR2AP12318 317 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 SLC6A6P31641 620 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 AQP2P41181 271 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 CRISP1P54107 249 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 RBPJQ06330 500 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 RPL18Q07020 188 aaKnown RBP10.05□□□□□ -0.8
TRAF4-206ENST00000454852 PUDPQ08623 228 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 NPRL3Q12980 569 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 PMS2P3Q13401 168 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 LRRC36Q1X8D7 754 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 SLC36A3Q495N2 470 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 ALG10Q5BKT4 473 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 NSUN5P2Q63ZY6 315 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 GFRALQ6UXV0 394 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 DPY19L2P2Q6ZN68 376 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 LSRQ86X29 649 aaPredicted RBP10.05□□□□□ -0.8
TRAF4-206ENST00000454852 MEX3DQ86XN8 651 aaKnown RBP10.05□□□□□ -0.8
TRAF4-206ENST00000454852 TMEM99Q8N816 258 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 ANKK1Q8NFD2 765 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 OR51A7Q8NH64 312 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 FANK1Q8TC84 345 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 OXGR1Q96P68 337 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 GRIP2Q9C0E4 1043 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 BCO1Q9HAY6 547 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 SLC25A19Q9HC21 320 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 NRIP3Q9NQ35 241 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 PNPLA3Q9NST1 481 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 TNFRSF10DQ9UBN6 386 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 SEC14L4Q9UDX3 406 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 ING1Q9UK53 422 aaPredicted RBP10.05□□□□□ -0.8
TRAF4-206ENST00000454852 BAIAP2Q9UQB8 552 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 CAMK2AQ9UQM7 478 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 NOX1Q9Y5S8 564 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 SHANK1Q9Y566 2161 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 NBEAQ8NFP9 2946 aa10.05□□□□□ -0.8
TRAF4-206ENST00000454852 COL6A6A6NMZ7 2263 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 MBD3L4A6NDZ8 208 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-206ENST00000454852 MBD3L3A6NE82 208 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-206ENST00000454852 MBD3L5A6NJ08 208 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-206ENST00000454852 ZAR1LA6NP61 321 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 ZNF724A8MTY0 619 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 H0YAE9 185 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 BHLHE40O14503 412 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 IDH3BO43837 385 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 MITFO75030 526 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-206ENST00000454852 OR6A2O95222 327 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 SYNGR4O95473 234 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 CD14P08571 375 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 ADORA3P0DMS8 318 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 GIPRP48546 466 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 CDK5Q00535 292 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 SRYQ05066 204 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 SLC17A1Q14916 467 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 PON3Q15166 354 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 RNPS1Q15287 305 aaKnown RBP10.04□□□□□ -0.8
TRAF4-206ENST00000454852 C3AR1Q16581 482 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 ACSF3Q4G176 576 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-206ENST00000454852 GTF2IRD2BQ6EKJ0 949 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 THSD4Q6ZMP0 1018 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 FCRLAQ7L513 359 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 CHMP1BQ7LBR1 199 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 FAM122BQ7Z309 247 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 GTF2IRD2Q86UP8 949 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 LNX2Q8N448 690 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 GALNT4Q8N4A0 578 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 OR8D4Q8NGM9 314 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 MOSPD2Q8NHP6 518 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 MBD3L2Q8NHZ7 208 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-206ENST00000454852 WNT2BQ93097 391 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 HRASLS5Q96KN8 279 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 BBC3Q96PG8 261 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-206ENST00000454852 MBOAT4Q96T53 435 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 PITX2Q99697 317 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 TACO1Q9BSH4 297 aaKnown RBP10.04□□□□□ -0.8
TRAF4-206ENST00000454852 PLA2G12AQ9BZM1 189 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 ENKD1Q9H0I2 346 aa10.04□□□□□ -0.8
TRAF4-206ENST00000454852 TP63Q9H3D4 680 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-206ENST00000454852 EGLN3Q9H6Z9 239 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms