RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 PRKCAP17252 672 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 SHC1P29353 583 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 ZNF85Q03923 595 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 FHL1Q13642 323 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 ODF4Q2M2E3 257 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 VASH1Q7L8A9 365 aaPredicted RBP12.41□□□□□ -0.42
CLK3-203ENST00000454830 LYSMD2Q8IV50 215 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 APCDD1LQ8NCL9 501 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 NPEPL1Q8NDH3 523 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 C17orf47Q8NEP4 570 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 RXFP3Q9NSD7 469 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 ZFAND5O76080 213 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 WISP1O95388 367 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 MSL3P1P0C860 447 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 MAML2Q8IZL2 1156 aaPredicted RBP12.41□□□□□ -0.42
CLK3-203ENST00000454830 TMEM105Q8N8V8 129 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 FAM181AQ8N9Y4 354 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 GHSRQ92847 366 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 AKAP7Q9P0M2 348 aaPredicted RBP12.41□□□□□ -0.42
CLK3-203ENST00000454830 TRAV36DV7A0A075B6V5 113 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 TRBV2A0A0J9YWF9 115 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 ANKRD34CP0C6C1 535 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 INPP1P49441 399 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 POLR2HP52434 150 aaKnown RBP12.41□□□□□ -0.42
CLK3-203ENST00000454830 PRAMEF20Q5VT98 475 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 THEM6Q8WUY1 208 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 THAP4Q8WY91 577 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 TMEM234Q8WY98 164 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 SLC39A1Q9NY26 324 aa12.41□□□□□ -0.42
CLK3-203ENST00000454830 A0A075B6Q4 140 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 TMEM72A0PK05 275 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 FUOMA2VDF0 154 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 OR6C70A6NIJ9 312 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 LDOC1O95751 146 aaPredicted RBP12.4□□□□□ -0.42
CLK3-203ENST00000454830 GPANK1O95872 356 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 EFR3AQ14156 821 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 ZNF248Q8NDW4 579 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 MROQ9BYG7 248 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 INPP5EQ9NRR6 644 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 ACOXLQ9NUZ1 547 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 RALGAPA1Q6GYQ0 2036 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 F8A1P23610 371 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 DIO1P49895 249 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 BCAP31P51572 246 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 FAM220AQ7Z4H9 259 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 MRPL48Q96GC5 212 aaKnown RBP12.4□□□□□ -0.42
CLK3-203ENST00000454830 JSRP1Q96MG2 331 aaPredicted RBP12.4□□□□□ -0.42
CLK3-203ENST00000454830 SPSB2Q99619 263 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 TGIF2Q9GZN2 237 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 NXF2Q9GZY0 626 aaKnown RBP12.4□□□□□ -0.42
CLK3-203ENST00000454830 HIF3AQ9Y2N7 669 aa12.4□□□□□ -0.42
CLK3-203ENST00000454830 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.4□□□□□ -0.43
CLK3-203ENST00000454830 BOLA2-SMG1P6H3BVE0 249 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 OR2T7P0C7T2 308 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 SDHAP31040 664 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 SLC26A5P58743 744 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 PSPHP78330 225 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 IL18Q14116 193 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 MELKQ14680 651 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 OR7A5Q15622 319 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 ZNF181Q2M3W8 571 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 C1orf140Q5VVS0 124 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 IL20RBQ6UXL0 311 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 PM20D2Q8IYS1 436 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 POMGNT2Q8NAT1 580 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 OR5M1Q8NGP8 315 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 OR2T27Q8NH04 317 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 GPR119Q8TDV5 335 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 PDCD1LG2Q9BQ51 273 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 ZNF649Q9BS31 505 aa12.4□□□□□ -0.43
CLK3-203ENST00000454830 ING1Q9UK53 422 aaPredicted RBP12.4□□□□□ -0.43
CLK3-203ENST00000454830 ARPC3O15145 178 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 TO15178 435 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 HPGDSO60760 199 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 SLC2A5P22732 501 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 CLDN6P56747 220 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 TAS2R43P59537 309 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 OXA1LQ15070 435 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 ACSM3Q53FZ2 586 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 GRINAQ7Z429 371 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 SYT9Q86SS6 491 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 ZNF554Q86TJ5 538 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 YIPF7Q8N8F6 280 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 DTWD2Q8NBA8 298 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 ZNF485Q8NCK3 441 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 GALNT6Q8NCL4 622 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 OR10G3Q8NGC4 313 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 TEKT2Q9UIF3 430 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 A0A1B0GVC2 190 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 A6NIN4 97 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 CELA2AP08217 269 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 OR8G3PP0DMU2 310 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 MPLP40238 635 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 TMED10P49755 219 aaKnown RBP12.39□□□□□ -0.43
CLK3-203ENST00000454830 GDI2P50395 445 aaKnown RBP12.39□□□□□ -0.43
CLK3-203ENST00000454830 C17orf67Q0P5P2 114 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 GLYR1Q49A26 553 aaPredicted RBP12.39□□□□□ -0.43
CLK3-203ENST00000454830 ARSKQ6UWY0 536 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 CCDC190Q86UF4 302 aa12.39□□□□□ -0.43
CLK3-203ENST00000454830 SLC43A2Q8N370 569 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms