RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 HEATR5AQ86XA9 2040 aa16.02■□□□□ 0.15
SQSTM1-204ENST00000453046 VPS13CQ709C8 3753 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 FRS3O43559 492 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 UBTFL6P0CB48 400 aaPredicted RBP16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 ZNF23P17027 643 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 SMIM11AP58511 58 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 NKX6-1P78426 367 aaPredicted RBP16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 SKP2Q13309 424 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 ACKR1Q16570 336 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 C3orf33Q6P1S2 294 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 SHQ1Q6PI26 577 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 C22orf34Q6ZV56 151 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 PLEKHM3Q6ZWE6 761 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 RBM45Q8IUH3 476 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 TUSC5Q8IXB3 177 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 PIK3C3Q8NEB9 887 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 WFDC11Q8NEX6 87 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 OR5K1Q8NHB7 308 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 PIGTQ969N2 578 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 NRBF2Q96F24 287 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 ANKRD19PQ9H560 264 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 SERINC1Q9NRX5 453 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 VNN3Q9NY84 501 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 A4GNTQ9UNA3 340 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 LYVE1Q9Y5Y7 322 aa16.01■□□□□ 0.15
SQSTM1-204ENST00000453046 A0A1W2PNR3 127 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 SAC3D1A6NKF1 404 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 J3KTA2 159 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 SMPD2O60906 423 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 BCAS1O75363 584 aaPredicted RBP16■□□□□ 0.15
SQSTM1-204ENST00000453046 OR5F1O95221 314 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 H1F0P07305 194 aaKnown RBP16■□□□□ 0.15
SQSTM1-204ENST00000453046 PGCP20142 388 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 TAS2R41P59536 307 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 SLC25A53Q5H9E4 307 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 BEX5Q5H9J7 111 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 LPCAT4Q643R3 524 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 ALKBH2Q6NS38 261 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 HIPK1Q86Z02 1210 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 ZDHHC13Q8IUH4 622 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 P3H2Q8IVL5 708 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 SLC43A2Q8N370 569 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 PACRGLQ8N7B6 248 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 TMEM234Q8WY98 164 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 ST8SIA1Q92185 356 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 MCHR1Q99705 422 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 CCL19Q99731 98 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 OSBPL10Q9BXB5 764 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 ACTR6Q9GZN1 396 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 GABARAPL1Q9H0R8 117 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 COQ10BQ9H8M1 238 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 KLHL13Q9P2N7 655 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 GPR52Q9Y2T5 361 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 ACANP16112 2415 aa16■□□□□ 0.15
SQSTM1-204ENST00000453046 IGHV3-15A0A0B4J1V0 119 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 A0A1W2PRQ8 180 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 TNFRSF11BO00300 401 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 FFAR1O14842 300 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 ARHGEF9O43307 516 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 GADD45GO95257 159 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 NTN1O95631 604 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 THBDP07204 575 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 YES1P07947 543 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 THRBP10828 461 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 UQCRBP14927 111 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 FOSL1P15407 271 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 ENPP1P22413 925 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 HOXC12P31275 282 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 YAP1P46937 504 aaKnown RBP15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 ARHGDIAP52565 204 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 CDH12P55289 794 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 RAC3P60763 192 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 MERTKQ12866 999 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 EPS8Q12929 822 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 DGCR6Q14129 220 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 ENTPD8Q5MY95 495 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 SHEQ5VZ18 495 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 NUFIP2Q7Z417 695 aaKnown RBP15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 WFDC8Q8IUA0 241 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 STEAP2Q8NFT2 490 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 OR4C15Q8NGM1 316 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 ZNF563Q8TA94 476 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 ZNF524Q96C55 264 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 HS3ST6Q96QI5 342 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 OR5B2Q96R09 309 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 CIB1Q99828 191 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 TACO1Q9BSH4 297 aaKnown RBP15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 FNDC11Q9BVV2 318 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 TRIM2Q9C040 744 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 NMNAT1Q9HAN9 279 aaPredicted RBP15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 GP6Q9HCN6 339 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 KLHL9Q9P2J3 617 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 PRDM4Q9UKN5 801 aa15.99■□□□□ 0.15
SQSTM1-204ENST00000453046 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.98■□□□□ 0.15
SQSTM1-204ENST00000453046 TRAPPC13A5PLN9 417 aa15.98■□□□□ 0.15
SQSTM1-204ENST00000453046 ARRDC5A6NEK1 342 aa15.98■□□□□ 0.15
SQSTM1-204ENST00000453046 G3V2T6 193 aa15.98■□□□□ 0.15
SQSTM1-204ENST00000453046 ETV2O00321 342 aaPredicted RBP15.98■□□□□ 0.15
SQSTM1-204ENST00000453046 FAAHO00519 579 aa15.98■□□□□ 0.15
SQSTM1-204ENST00000453046 TPST2O60704 377 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms