RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 THOC1Q96FV9 657 aaKnown RBP11.28□□□□□ -0.6
CHD3-206ENST00000452447 ALKBH3Q96Q83 286 aaPredicted RBP11.28□□□□□ -0.6
CHD3-206ENST00000452447 PTDSS2Q9BVG9 487 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 CACNG6Q9BXT2 260 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 REG4Q9BYZ8 158 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 IKZF5Q9H5V7 419 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 TMEM27Q9HBJ8 222 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 OBP2BQ9NPH6 170 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 ZNF446Q9NWS9 450 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 TESQ9UGI8 421 aaKnown RBP11.28□□□□□ -0.6
CHD3-206ENST00000452447 LEF1Q9UJU2 399 aaPredicted RBP11.28□□□□□ -0.6
CHD3-206ENST00000452447 NDUFAF1Q9Y375 327 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 AIM2O14862 343 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 ANGPT2O15123 496 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 SSX4O60224 188 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 TPST1O60507 370 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 LGI1O95970 557 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 PAX7P23759 505 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 HTR2AP28223 471 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 NUDT6P53370 316 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 CLDN17P56750 224 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 UBE2NP61088 152 aaKnown RBP11.28□□□□□ -0.6
CHD3-206ENST00000452447 SLC25A3Q00325 362 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 IL1RL1Q01638 556 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 C1DQ13901 141 aaKnown RBP11.28□□□□□ -0.6
CHD3-206ENST00000452447 RAB35Q15286 201 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 FAM91A1Q658Y4 838 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 HMBOX1Q6NT76 420 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 NET1Q7Z628 596 aaPredicted RBP11.28□□□□□ -0.6
CHD3-206ENST00000452447 ARMC8Q8IUR7 673 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 MAPK1IP1LQ8NDC0 245 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 HIPK4Q8NE63 616 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 STON2Q8WXE9 905 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 TAAR8Q969N4 342 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 SLC47A1Q96FL8 570 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 OXGR1Q96P68 337 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 KCNS3Q9BQ31 491 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 ANGPT4Q9Y264 503 aa11.28□□□□□ -0.6
CHD3-206ENST00000452447 TRAV36DV7A0A075B6V5 113 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 INAFM1C9JVW0 142 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 UPK3AO75631 287 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 SASH3O75995 380 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 TP53P04637 393 aaPredicted RBP11.27□□□□□ -0.61
CHD3-206ENST00000452447 CHRNB3Q05901 458 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 LGALS3BPQ08380 585 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 CYP51A1Q16850 503 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 TBRG1Q3YBR2 411 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 RUNDC3AQ59EK9 446 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 DLEU7Q6UYE1 221 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 B3GLCTQ6Y288 498 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 DHDDSQ86SQ9 333 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 RANBP3LQ86VV4 465 aaPredicted RBP11.27□□□□□ -0.61
CHD3-206ENST00000452447 C11orf65Q8NCR3 313 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 OR1K1Q8NGR3 316 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 BOD1Q96IK1 185 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 SIKE1Q9BRV8 207 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 RHNO1Q9BSD3 238 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 PRR14Q9BWN1 585 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 RSPO3Q9BXY4 272 aaPredicted RBP11.27□□□□□ -0.61
CHD3-206ENST00000452447 LINC00470Q9BZP3 86 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 EVA1AQ9H8M9 152 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 NPHS2Q9NP85 383 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 SEC14L4Q9UDX3 406 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 RCE1Q9Y256 329 aa11.27□□□□□ -0.61
CHD3-206ENST00000452447 CHD3Q12873 2000 aaKnown RBP11.26□□□□□ -0.61
CHD3-206ENST00000452447 M0R082 166 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 AKAP8O43823 692 aaKnown RBP11.26□□□□□ -0.61
CHD3-206ENST00000452447 SLC43A1O75387 559 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 NQO1P15559 274 aaKnown RBP11.26□□□□□ -0.61
CHD3-206ENST00000452447 GRPRP30550 384 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 APOBEC3AP31941 199 aaPredicted RBP11.26□□□□□ -0.61
CHD3-206ENST00000452447 SH3BGRP55822 239 aaPredicted RBP11.26□□□□□ -0.61
CHD3-206ENST00000452447 ROR2Q01974 943 aaKnown RBP11.26□□□□□ -0.61
CHD3-206ENST00000452447 RBBP4Q09028 425 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 MFSD13AQ14CX5 517 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 OR1Q1Q15612 314 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 ADRM1Q16186 407 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 C11orf71Q6IPW1 123 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 ANKRD16Q6P6B7 361 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 H1FNTQ75WM6 255 aaPredicted RBP11.26□□□□□ -0.61
CHD3-206ENST00000452447 COMTD1Q86VU5 262 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 DPP10Q8N608 796 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 ZNF417Q8TAU3 575 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 ANKRD27Q96NW4 1050 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 ZNF317Q96PQ6 595 aaPredicted RBP11.26□□□□□ -0.61
CHD3-206ENST00000452447 ZNF587Q96SQ5 575 aaPredicted RBP11.26□□□□□ -0.61
CHD3-206ENST00000452447 EPYCQ99645 322 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 CPPED1Q9BRF8 314 aaPredicted RBP11.26□□□□□ -0.61
CHD3-206ENST00000452447 MOKQ9UQ07 419 aa11.26□□□□□ -0.61
CHD3-206ENST00000452447 ATRQ13535 2644 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 A0A087WUJ7 227 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 A0A0G2JND7 137 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 ATP6V1G2-DDX39BF2Z307 99 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 MFN2O95140 757 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 CRYAAP02489 173 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 CBLP22681 906 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 MTPNP58546 118 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 DMTNQ08495 405 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 NFYCQ13952 458 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 CLEC2AQ6UVW9 174 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms